Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GABRA3P34903 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GABRA3P34903 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
GABRA3P34903 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 RPS2P52-201ENST00000469610 820 ntBASIC18.34■□□□□ 0.53
GABRA3P34903 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.34■□□□□ 0.53
GABRA3P34903 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GABRA3P34903 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.34■□□□□ 0.53
GABRA3P34903 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.34■□□□□ 0.53
GABRA3P34903 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GABRA3P34903 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRA3P34903 AC124283.5-201ENST00000624661 1809 ntBASIC18.34■□□□□ 0.53
GABRA3P34903 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA3P34903 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
GABRA3P34903 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.33■□□□□ 0.53
GABRA3P34903 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA3P34903 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GABRA3P34903 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA3P34903 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.33■□□□□ 0.53
GABRA3P34903 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA3P34903 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GABRA3P34903 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GABRA3P34903 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 SOX15-203ENST00000570788 1093 ntBASIC18.33■□□□□ 0.52
GABRA3P34903 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
GABRA3P34903 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRA3P34903 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRA3P34903 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.33■□□□□ 0.52
GABRA3P34903 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA3P34903 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA3P34903 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.33■□□□□ 0.52
GABRA3P34903 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA3P34903 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA3P34903 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.32■□□□□ 0.52
GABRA3P34903 RNA5SP413-201ENST00000516373 109 ntBASIC18.32■□□□□ 0.52
GABRA3P34903 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.32■□□□□ 0.52
GABRA3P34903 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.32■□□□□ 0.52
GABRA3P34903 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA3P34903 AL158211.5-201ENST00000623583 2518 ntBASIC18.32■□□□□ 0.52
GABRA3P34903 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 AC116351.2-201ENST00000606540 1585 ntBASIC18.32■□□□□ 0.52
GABRA3P34903 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
GABRA3P34903 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA3P34903 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
GABRA3P34903 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GABRA3P34903 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GABRA3P34903 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GABRA3P34903 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRA3P34903 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.31■□□□□ 0.52
GABRA3P34903 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.31■□□□□ 0.52
GABRA3P34903 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GABRA3P34903 AC120498.8-201ENST00000614275 531 ntBASIC18.31■□□□□ 0.52
GABRA3P34903 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRA3P34903 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRA3P34903 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA3P34903 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.31■□□□□ 0.52
GABRA3P34903 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms