Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC6A4P31645 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A4P31645 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC6A4P31645 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC6A4P31645 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SLC6A4P31645 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC6A4P31645 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A4P31645 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A4P31645 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A4P31645 AP001271.2-201ENST00000624018 1556 ntBASIC20.29■□□□□ 0.84
SLC6A4P31645 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A4P31645 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A4P31645 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SLC6A4P31645 AL135905.2-201ENST00000584934 1404 ntBASIC20.28■□□□□ 0.84
SLC6A4P31645 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SLC6A4P31645 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.28■□□□□ 0.84
SLC6A4P31645 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 TCF3P1-201ENST00000423021 1937 ntBASIC20.28■□□□□ 0.84
SLC6A4P31645 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC6A4P31645 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SLC6A4P31645 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC6A4P31645 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A4P31645 MIR4497-201ENST00000583208 89 ntBASIC20.28■□□□□ 0.84
SLC6A4P31645 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A4P31645 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC6A4P31645 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC6A4P31645 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A4P31645 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC6A4P31645 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC6A4P31645 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SLC6A4P31645 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC6A4P31645 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SLC6A4P31645 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC6A4P31645 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 TSPY7P-201ENST00000431358 1114 ntBASIC20.27■□□□□ 0.84
SLC6A4P31645 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC6A4P31645 KRT18P16-201ENST00000510337 1294 ntBASIC20.27■□□□□ 0.84
SLC6A4P31645 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC6A4P31645 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A4P31645 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC6A4P31645 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A4P31645 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A4P31645 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A4P31645 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A4P31645 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.27■□□□□ 0.83
SLC6A4P31645 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.27■□□□□ 0.83
SLC6A4P31645 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SLC6A4P31645 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC6A4P31645 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC6A4P31645 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A4P31645 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.26■□□□□ 0.83
SLC6A4P31645 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.26■□□□□ 0.83
SLC6A4P31645 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC6A4P31645 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
SLC6A4P31645 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC6A4P31645 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLC6A4P31645 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A4P31645 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC6A4P31645 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 TMEM179-206ENST00000616017 1645 ntBASIC20.25■□□□□ 0.83
SLC6A4P31645 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC6A4P31645 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC6A4P31645 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A4P31645 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A4P31645 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A4P31645 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A4P31645 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A4P31645 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC6A4P31645 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A4P31645 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms