Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.57■□□□□ 0.24
LMO1P25800 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.57■□□□□ 0.24
LMO1P25800 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.57■□□□□ 0.24
LMO1P25800 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LMO1P25800 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.56■□□□□ 0.24
LMO1P25800 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO1P25800 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO1P25800 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO1P25800 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 AL390719.1-204ENST00000412397 1219 ntBASIC16.56■□□□□ 0.24
LMO1P25800 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.56■□□□□ 0.24
LMO1P25800 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LMO1P25800 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.56■□□□□ 0.24
LMO1P25800 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.56■□□□□ 0.24
LMO1P25800 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LMO1P25800 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 AL158211.5-201ENST00000623583 2518 ntBASIC16.56■□□□□ 0.24
LMO1P25800 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LMO1P25800 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.55■□□□□ 0.24
LMO1P25800 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.55■□□□□ 0.24
LMO1P25800 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.55■□□□□ 0.24
LMO1P25800 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.55■□□□□ 0.24
LMO1P25800 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 MYC-209ENST00000641252 345 ntBASIC16.55■□□□□ 0.24
LMO1P25800 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 AC026471.1-201ENST00000564629 3026 ntBASIC16.55■□□□□ 0.24
LMO1P25800 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.55■□□□□ 0.24
LMO1P25800 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LMO1P25800 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO1P25800 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.54■□□□□ 0.24
LMO1P25800 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LMO1P25800 AC097658.1-201ENST00000475555 843 ntBASIC16.54■□□□□ 0.24
LMO1P25800 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO1P25800 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.54■□□□□ 0.24
LMO1P25800 AC116351.2-201ENST00000606540 1585 ntBASIC16.54■□□□□ 0.24
LMO1P25800 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LMO1P25800 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LMO1P25800 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LMO1P25800 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LMO1P25800 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms