Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
LAMA1P25391 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.39■□□□□ 0.69
LAMA1P25391 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
LAMA1P25391 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
LAMA1P25391 AL138966.2-201ENST00000621997 464 ntBASIC19.39■□□□□ 0.69
LAMA1P25391 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAMA1P25391 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAMA1P25391 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.39■□□□□ 0.69
LAMA1P25391 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.38■□□□□ 0.69
LAMA1P25391 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
LAMA1P25391 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.38■□□□□ 0.69
LAMA1P25391 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.38■□□□□ 0.69
LAMA1P25391 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LAMA1P25391 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.38■□□□□ 0.69
LAMA1P25391 AC244015.2-201ENST00000616358 1861 ntBASIC19.38■□□□□ 0.69
LAMA1P25391 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.38■□□□□ 0.69
LAMA1P25391 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAMA1P25391 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.38■□□□□ 0.69
LAMA1P25391 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.38■□□□□ 0.69
LAMA1P25391 AC093458.2-201ENST00000623150 629 ntBASIC19.38■□□□□ 0.69
LAMA1P25391 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.37■□□□□ 0.69
LAMA1P25391 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 KRT8P20-201ENST00000423953 1409 ntBASIC19.37■□□□□ 0.69
LAMA1P25391 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LAMA1P25391 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.37■□□□□ 0.69
LAMA1P25391 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
LAMA1P25391 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.37■□□□□ 0.69
LAMA1P25391 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.37■□□□□ 0.69
LAMA1P25391 AC069148.1-201ENST00000608741 768 ntBASIC19.37■□□□□ 0.69
LAMA1P25391 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.37■□□□□ 0.69
LAMA1P25391 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.37■□□□□ 0.69
LAMA1P25391 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.37■□□□□ 0.69
LAMA1P25391 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAMA1P25391 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 RCC2P6-201ENST00000526625 1557 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.36■□□□□ 0.69
LAMA1P25391 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 CCR12P-201ENST00000446203 998 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.36■□□□□ 0.69
LAMA1P25391 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 AC096733.2-201ENST00000609937 1394 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LAMA1P25391 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 AL117328.2-201ENST00000624617 1940 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LAMA1P25391 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LAMA1P25391 AC083849.1-201ENST00000615227 514 ntBASIC19.36■□□□□ 0.69
LAMA1P25391 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMA1P25391 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
LAMA1P25391 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 AL023803.3-201ENST00000615559 522 ntBASIC19.35■□□□□ 0.69
LAMA1P25391 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 SMG8-203ENST00000578922 2178 ntBASIC19.35■□□□□ 0.69
LAMA1P25391 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LAMA1P25391 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LAMA1P25391 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LAMA1P25391 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMA1P25391 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LAMA1P25391 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.35■□□□□ 0.69
LAMA1P25391 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LAMA1P25391 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms