Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
CCL1P22362 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.98■□□□□ 0.31
CCL1P22362 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCL1P22362 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.98■□□□□ 0.31
CCL1P22362 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCL1P22362 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.97■□□□□ 0.31
CCL1P22362 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.97■□□□□ 0.31
CCL1P22362 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.97■□□□□ 0.31
CCL1P22362 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.97■□□□□ 0.31
CCL1P22362 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 MIR663A-201ENST00000385250 93 ntBASIC16.97■□□□□ 0.31
CCL1P22362 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.97■□□□□ 0.31
CCL1P22362 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.97■□□□□ 0.31
CCL1P22362 AC005829.2-201ENST00000571422 1056 ntBASIC16.97■□□□□ 0.31
CCL1P22362 IKBKGP1-201ENST00000612193 1073 ntBASIC16.97■□□□□ 0.31
CCL1P22362 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCL1P22362 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCL1P22362 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCL1P22362 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.97■□□□□ 0.31
CCL1P22362 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL1P22362 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL1P22362 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.96■□□□□ 0.31
CCL1P22362 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL1P22362 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCL1P22362 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL1P22362 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL1P22362 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL1P22362 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCL1P22362 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.96■□□□□ 0.3
CCL1P22362 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCL1P22362 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL1P22362 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL1P22362 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL1P22362 AL390719.1-204ENST00000412397 1219 ntBASIC16.95■□□□□ 0.3
CCL1P22362 CROCCP5-201ENST00000436658 830 ntBASIC16.95■□□□□ 0.3
CCL1P22362 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL1P22362 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.95■□□□□ 0.3
CCL1P22362 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCL1P22362 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL1P22362 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL1P22362 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.94■□□□□ 0.3
CCL1P22362 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL1P22362 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.94■□□□□ 0.3
CCL1P22362 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 MIPEPP3-201ENST00000412105 444 ntBASIC16.94■□□□□ 0.3
CCL1P22362 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCL1P22362 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.94■□□□□ 0.3
CCL1P22362 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCL1P22362 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCL1P22362 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL1P22362 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
CCL1P22362 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms