Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IGHV3-43DP0DP04 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 MIPEPP3-201ENST00000412105 444 ntBASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 AC092666.2-201ENST00000613287 246 ntBASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV3-43DP0DP04 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 SLC29A4P1-201ENST00000398760 971 ntBASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV3-43DP0DP04 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 DUSP5P2-201ENST00000426873 1033 ntBASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 AC023632.3-201ENST00000521633 145 ntBASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 HCG11-201ENST00000411553 5696 ntBASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV3-43DP0DP04 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IGHV3-43DP0DP04 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms