Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
CHGBP05060 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CHGBP05060 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.76■■□□□ 1.39
CHGBP05060 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.76■■□□□ 1.39
CHGBP05060 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.76■■□□□ 1.39
CHGBP05060 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.76■■□□□ 1.39
CHGBP05060 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.76■■□□□ 1.39
CHGBP05060 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.76■■□□□ 1.39
CHGBP05060 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.76■■□□□ 1.39
CHGBP05060 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.76■■□□□ 1.39
CHGBP05060 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.76■■□□□ 1.39
CHGBP05060 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
CHGBP05060 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CHGBP05060 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.76■■□□□ 1.39
CHGBP05060 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHGBP05060 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHGBP05060 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHGBP05060 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.75■■□□□ 1.39
CHGBP05060 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHGBP05060 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.75■■□□□ 1.39
CHGBP05060 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.75■■□□□ 1.39
CHGBP05060 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.75■■□□□ 1.39
CHGBP05060 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.75■■□□□ 1.39
CHGBP05060 AC110285.5-201ENST00000611501 352 ntBASIC23.75■■□□□ 1.39
CHGBP05060 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.75■■□□□ 1.39
CHGBP05060 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHGBP05060 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.74■■□□□ 1.39
CHGBP05060 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 AC093827.2-201ENST00000512654 315 ntBASIC23.74■■□□□ 1.39
CHGBP05060 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.74■■□□□ 1.39
CHGBP05060 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.74■■□□□ 1.39
CHGBP05060 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.74■■□□□ 1.39
CHGBP05060 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.74■■□□□ 1.39
CHGBP05060 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.74■■□□□ 1.39
CHGBP05060 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHGBP05060 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHGBP05060 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CHGBP05060 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.73■■□□□ 1.39
CHGBP05060 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CHGBP05060 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.73■■□□□ 1.39
CHGBP05060 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.73■■□□□ 1.39
CHGBP05060 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CHGBP05060 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHGBP05060 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.72■■□□□ 1.39
CHGBP05060 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.72■■□□□ 1.39
CHGBP05060 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.72■■□□□ 1.39
CHGBP05060 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.72■■□□□ 1.39
CHGBP05060 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.72■■□□□ 1.39
CHGBP05060 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.72■■□□□ 1.39
CHGBP05060 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.72■■□□□ 1.39
CHGBP05060 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHGBP05060 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms