Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
HMGCRP04035 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HMGCRP04035 CLDN5-201ENST00000403084 2357 ntBASIC22.32■■□□□ 1.16
HMGCRP04035 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCRP04035 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCRP04035 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.32■■□□□ 1.16
HMGCRP04035 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.32■■□□□ 1.16
HMGCRP04035 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HMGCRP04035 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.31■■□□□ 1.16
HMGCRP04035 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 RCC2P6-201ENST00000526625 1557 ntBASIC22.31■■□□□ 1.16
HMGCRP04035 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HMGCRP04035 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 TUBB8P6-201ENST00000436895 1288 ntBASIC22.31■■□□□ 1.16
HMGCRP04035 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.31■■□□□ 1.16
HMGCRP04035 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
HMGCRP04035 AC011298.2-201ENST00000617989 482 ntBASIC22.31■■□□□ 1.16
HMGCRP04035 AL121956.5-201ENST00000625261 221 ntBASIC22.31■■□□□ 1.16
HMGCRP04035 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.31■■□□□ 1.16
HMGCRP04035 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCRP04035 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HMGCRP04035 AC116351.2-201ENST00000606540 1585 ntBASIC22.3■■□□□ 1.16
HMGCRP04035 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HMGCRP04035 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HMGCRP04035 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 PCED1CP-201ENST00000419887 785 ntBASIC22.3■■□□□ 1.16
HMGCRP04035 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.3■■□□□ 1.16
HMGCRP04035 SLC25A1P2-201ENST00000430693 912 ntBASIC22.3■■□□□ 1.16
HMGCRP04035 MFAP1P1-201ENST00000442257 1255 ntBASIC22.3■■□□□ 1.16
HMGCRP04035 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
HMGCRP04035 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCRP04035 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCRP04035 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.3■■□□□ 1.16
HMGCRP04035 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCRP04035 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HMGCRP04035 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCRP04035 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCRP04035 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCRP04035 AC096733.2-201ENST00000609937 1394 ntBASIC22.29■■□□□ 1.16
HMGCRP04035 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.29■■□□□ 1.16
HMGCRP04035 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCRP04035 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCRP04035 AC010653.2-201ENST00000623505 997 ntBASIC22.29■■□□□ 1.16
HMGCRP04035 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCRP04035 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCRP04035 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCRP04035 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HMGCRP04035 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCRP04035 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HMGCRP04035 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 AC026310.3-201ENST00000625186 2373 ntBASIC22.28■■□□□ 1.16
HMGCRP04035 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGCRP04035 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGCRP04035 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
HMGCRP04035 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.28■■□□□ 1.16
HMGCRP04035 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.28■■□□□ 1.16
HMGCRP04035 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.28■■□□□ 1.16
HMGCRP04035 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 TFP1-202ENST00000475455 1573 ntBASIC22.28■■□□□ 1.16
HMGCRP04035 AC121338.2-201ENST00000622535 1744 ntBASIC22.28■■□□□ 1.16
HMGCRP04035 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCRP04035 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
HMGCRP04035 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGCRP04035 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCRP04035 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGCRP04035 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
HMGCRP04035 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms