Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC087388.1-201ENST00000571370 1112 ntBASIC20.53■□□□□ 0.88
LMNAP02545 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LMNAP02545 NTF6B-201ENST00000591913 560 ntBASIC20.53■□□□□ 0.88
LMNAP02545 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNAP02545 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LMNAP02545 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LMNAP02545 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
LMNAP02545 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.53■□□□□ 0.88
LMNAP02545 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
LMNAP02545 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LMNAP02545 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LMNAP02545 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNAP02545 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
LMNAP02545 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LMNAP02545 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.52■□□□□ 0.88
LMNAP02545 TPM4P1-201ENST00000436100 807 ntBASIC20.52■□□□□ 0.88
LMNAP02545 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.52■□□□□ 0.88
LMNAP02545 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LMNAP02545 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LMNAP02545 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.52■□□□□ 0.88
LMNAP02545 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.52■□□□□ 0.88
LMNAP02545 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LMNAP02545 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 AC087289.5-201ENST00000586076 3175 ntBASIC20.52■□□□□ 0.87
LMNAP02545 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 AP005212.1-201ENST00000581547 1997 ntBASIC20.52■□□□□ 0.87
LMNAP02545 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.52■□□□□ 0.87
LMNAP02545 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LMNAP02545 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.51■□□□□ 0.87
LMNAP02545 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.51■□□□□ 0.87
LMNAP02545 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.51■□□□□ 0.87
LMNAP02545 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.51■□□□□ 0.87
LMNAP02545 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LMNAP02545 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
LMNAP02545 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LMNAP02545 AFG3L1P-217ENST00000557444 2447 ntBASIC20.51■□□□□ 0.87
LMNAP02545 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
LMNAP02545 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.5■□□□□ 0.87
LMNAP02545 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LMNAP02545 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LMNAP02545 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms