Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.44■■□□□ 1.02
TIMP1P01033 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.44■■□□□ 1.02
TIMP1P01033 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.44■■□□□ 1.02
TIMP1P01033 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TIMP1P01033 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TIMP1P01033 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TIMP1P01033 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TIMP1P01033 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.43■■□□□ 1.02
TIMP1P01033 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.43■■□□□ 1.02
TIMP1P01033 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
TIMP1P01033 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TIMP1P01033 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.43■■□□□ 1.02
TIMP1P01033 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TIMP1P01033 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TIMP1P01033 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TIMP1P01033 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 DPP3P2-201ENST00000416030 1696 ntBASIC21.42■■□□□ 1.02
TIMP1P01033 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.42■■□□□ 1.02
TIMP1P01033 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 Z85996.1-201ENST00000494644 937 ntBASIC21.42■■□□□ 1.02
TIMP1P01033 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.42■■□□□ 1.02
TIMP1P01033 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.42■■□□□ 1.02
TIMP1P01033 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.42■■□□□ 1.02
TIMP1P01033 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
TIMP1P01033 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.42■■□□□ 1.02
TIMP1P01033 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.42■■□□□ 1.02
TIMP1P01033 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.42■■□□□ 1.02
TIMP1P01033 AL024507.2-201ENST00000606070 2574 ntBASIC21.42■■□□□ 1.02
TIMP1P01033 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TIMP1P01033 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.41■■□□□ 1.02
TIMP1P01033 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TIMP1P01033 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.41■■□□□ 1.02
TIMP1P01033 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TIMP1P01033 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TIMP1P01033 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.41■■□□□ 1.02
TIMP1P01033 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.41■■□□□ 1.02
TIMP1P01033 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.41■■□□□ 1.02
TIMP1P01033 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.41■■□□□ 1.02
TIMP1P01033 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TIMP1P01033 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.41■■□□□ 1.02
TIMP1P01033 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TIMP1P01033 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.41■■□□□ 1.02
TIMP1P01033 AL691432.3-201ENST00000621860 400 ntBASIC21.41■■□□□ 1.02
TIMP1P01033 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TIMP1P01033 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TIMP1P01033 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TIMP1P01033 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.41■■□□□ 1.02
TIMP1P01033 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TIMP1P01033 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.4■■□□□ 1.02
TIMP1P01033 KRT18P38-201ENST00000449496 1282 ntBASIC21.4■■□□□ 1.02
TIMP1P01033 CA15P1-201ENST00000481698 905 ntBASIC21.4■■□□□ 1.02
TIMP1P01033 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TIMP1P01033 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TIMP1P01033 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.4■■□□□ 1.02
TIMP1P01033 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.4■■□□□ 1.02
TIMP1P01033 AL136038.3-201ENST00000561909 1096 ntBASIC21.4■■□□□ 1.02
TIMP1P01033 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TIMP1P01033 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TIMP1P01033 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TIMP1P01033 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TIMP1P01033 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.4■■□□□ 1.02
TIMP1P01033 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TIMP1P01033 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TIMP1P01033 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.39■■□□□ 1.02
TIMP1P01033 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
TIMP1P01033 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.39■■□□□ 1.02
TIMP1P01033 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TIMP1P01033 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.39■■□□□ 1.01
TIMP1P01033 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TIMP1P01033 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.39■■□□□ 1.01
TIMP1P01033 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.39■■□□□ 1.01
TIMP1P01033 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TIMP1P01033 PHGDH-210ENST00000641115 1638 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms