Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 TFP1-202ENST00000475455 1573 ntBASIC20.77■□□□□ 0.92
RTN3O95197 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.77■□□□□ 0.92
RTN3O95197 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.77■□□□□ 0.92
RTN3O95197 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.77■□□□□ 0.92
RTN3O95197 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTN3O95197 AP006587.1-201ENST00000534129 1502 ntBASIC20.77■□□□□ 0.92
RTN3O95197 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.77■□□□□ 0.92
RTN3O95197 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTN3O95197 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RTN3O95197 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTN3O95197 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN3O95197 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RTN3O95197 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RTN3O95197 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RTN3O95197 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.76■□□□□ 0.91
RTN3O95197 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTN3O95197 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN3O95197 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTN3O95197 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN3O95197 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RTN3O95197 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.76■□□□□ 0.91
RTN3O95197 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTN3O95197 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTN3O95197 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTN3O95197 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN3O95197 FEM1AP1-201ENST00000431297 1995 ntBASIC20.76■□□□□ 0.91
RTN3O95197 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 GABARAPL3-202ENST00000624044 1851 ntBASIC20.75■□□□□ 0.91
RTN3O95197 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
RTN3O95197 AL353807.1-201ENST00000427475 662 ntBASIC20.75■□□□□ 0.91
RTN3O95197 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN3O95197 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 MIR4497-201ENST00000583208 89 ntBASIC20.75■□□□□ 0.91
RTN3O95197 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN3O95197 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN3O95197 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 HTR7P1-201ENST00000538670 1336 ntBASIC20.75■□□□□ 0.91
RTN3O95197 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
RTN3O95197 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RTN3O95197 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN3O95197 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN3O95197 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RTN3O95197 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN3O95197 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN3O95197 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN3O95197 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN3O95197 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.74■□□□□ 0.91
RTN3O95197 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.74■□□□□ 0.91
RTN3O95197 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN3O95197 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN3O95197 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.74■□□□□ 0.91
RTN3O95197 AL049637.2-201ENST00000641778 930 ntBASIC20.74■□□□□ 0.91
RTN3O95197 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN3O95197 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN3O95197 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms