Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.56■□□□□ 0.4
CDRT1O95170 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.56■□□□□ 0.4
CDRT1O95170 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.56■□□□□ 0.4
CDRT1O95170 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDRT1O95170 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
CDRT1O95170 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDRT1O95170 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.56■□□□□ 0.4
CDRT1O95170 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CDRT1O95170 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDRT1O95170 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDRT1O95170 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDRT1O95170 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CDRT1O95170 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDRT1O95170 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDRT1O95170 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.54■□□□□ 0.4
CDRT1O95170 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.54■□□□□ 0.4
CDRT1O95170 AC142381.2-201ENST00000566120 298 ntBASIC17.54■□□□□ 0.4
CDRT1O95170 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.54■□□□□ 0.4
CDRT1O95170 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDRT1O95170 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.54■□□□□ 0.4
CDRT1O95170 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDRT1O95170 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.54■□□□□ 0.4
CDRT1O95170 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDRT1O95170 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.54■□□□□ 0.4
CDRT1O95170 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
CDRT1O95170 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.53■□□□□ 0.4
CDRT1O95170 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDRT1O95170 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CDRT1O95170 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 AL139246.5-201ENST00000606645 996 ntBASIC17.53■□□□□ 0.4
CDRT1O95170 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.53■□□□□ 0.4
CDRT1O95170 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 AC104581.1-202ENST00000635932 2618 ntBASIC17.53■□□□□ 0.4
CDRT1O95170 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDRT1O95170 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDRT1O95170 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.53■□□□□ 0.4
CDRT1O95170 AC018470.1-201ENST00000624790 3129 ntBASIC17.53■□□□□ 0.4
CDRT1O95170 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDRT1O95170 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDRT1O95170 CROCCP3-202ENST00000420820 1947 ntBASIC17.53■□□□□ 0.4
CDRT1O95170 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.52■□□□□ 0.4
CDRT1O95170 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDRT1O95170 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDRT1O95170 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.52■□□□□ 0.4
CDRT1O95170 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDRT1O95170 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms