Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.76■□□□□ 0.91
BEST1O76090 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
BEST1O76090 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BEST1O76090 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BEST1O76090 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BEST1O76090 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
BEST1O76090 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.75■□□□□ 0.91
BEST1O76090 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
BEST1O76090 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.75■□□□□ 0.91
BEST1O76090 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.75■□□□□ 0.91
BEST1O76090 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.75■□□□□ 0.91
BEST1O76090 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BEST1O76090 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.75■□□□□ 0.91
BEST1O76090 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
BEST1O76090 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BEST1O76090 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.74■□□□□ 0.91
BEST1O76090 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.74■□□□□ 0.91
BEST1O76090 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
BEST1O76090 RPS2P55-201ENST00000397318 883 ntBASIC20.74■□□□□ 0.91
BEST1O76090 AL596275.1-201ENST00000423464 877 ntBASIC20.74■□□□□ 0.91
BEST1O76090 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST1O76090 AC107956.1-201ENST00000494359 873 ntBASIC20.74■□□□□ 0.91
BEST1O76090 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.74■□□□□ 0.91
BEST1O76090 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BEST1O76090 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
BEST1O76090 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.74■□□□□ 0.91
BEST1O76090 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST1O76090 HTR7P1-201ENST00000538670 1336 ntBASIC20.74■□□□□ 0.91
BEST1O76090 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BEST1O76090 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST1O76090 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 AC009237.14-201ENST00000609975 1594 ntBASIC20.73■□□□□ 0.91
BEST1O76090 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BEST1O76090 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 AC073130.3-201ENST00000624389 2278 ntBASIC20.73■□□□□ 0.91
BEST1O76090 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 YBX1P10-201ENST00000444752 975 ntBASIC20.73■□□□□ 0.91
BEST1O76090 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.73■□□□□ 0.91
BEST1O76090 RARRES2P10-201ENST00000564312 460 ntBASIC20.73■□□□□ 0.91
BEST1O76090 AC004264.1-201ENST00000608354 794 ntBASIC20.73■□□□□ 0.91
BEST1O76090 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.73■□□□□ 0.91
BEST1O76090 TMEM179-206ENST00000616017 1645 ntBASIC20.73■□□□□ 0.91
BEST1O76090 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BEST1O76090 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST1O76090 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BEST1O76090 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
BEST1O76090 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
BEST1O76090 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.72■□□□□ 0.91
BEST1O76090 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST1O76090 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.72■□□□□ 0.91
BEST1O76090 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST1O76090 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
BEST1O76090 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST1O76090 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BEST1O76090 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms