Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 MTDHP1-201ENST00000605323 784 ntBASIC18.52■□□□□ 0.56
PRAMEF2O60811 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF2O60811 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF2O60811 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF2O60811 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.52■□□□□ 0.55
PRAMEF2O60811 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF2O60811 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.51■□□□□ 0.55
PRAMEF2O60811 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF2O60811 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.51■□□□□ 0.55
PRAMEF2O60811 AL691432.2-201ENST00000607222 2038 ntBASIC18.5■□□□□ 0.55
PRAMEF2O60811 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 AC112907.3-201ENST00000577781 2400 ntBASIC18.5■□□□□ 0.55
PRAMEF2O60811 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 Z99916.2-201ENST00000604037 246 ntBASIC18.5■□□□□ 0.55
PRAMEF2O60811 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF2O60811 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF2O60811 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 PHGDH-210ENST00000641115 1638 ntBASIC18.49■□□□□ 0.55
PRAMEF2O60811 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 AC239809.2-201ENST00000415381 517 ntBASIC18.49■□□□□ 0.55
PRAMEF2O60811 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 MIR4497-201ENST00000583208 89 ntBASIC18.49■□□□□ 0.55
PRAMEF2O60811 AL023875.1-201ENST00000640777 796 ntBASIC18.49■□□□□ 0.55
PRAMEF2O60811 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF2O60811 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms