Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A2O43868 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC28A2O43868 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC28A2O43868 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A2O43868 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 POM121L13P-201ENST00000422362 380 ntBASIC18.97■□□□□ 0.63
SLC28A2O43868 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC28A2O43868 AL589743.5-201ENST00000616611 1050 ntBASIC18.97■□□□□ 0.63
SLC28A2O43868 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC28A2O43868 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SLC28A2O43868 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC28A2O43868 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC28A2O43868 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SLC28A2O43868 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC28A2O43868 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC28A2O43868 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC28A2O43868 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
SLC28A2O43868 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC28A2O43868 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC28A2O43868 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC28A2O43868 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
SLC28A2O43868 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SLC28A2O43868 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC28A2O43868 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC28A2O43868 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC28A2O43868 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SLC28A2O43868 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC28A2O43868 SMG8-203ENST00000578922 2178 ntBASIC18.94■□□□□ 0.62
SLC28A2O43868 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC28A2O43868 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 CDV3P1-201ENST00000471403 739 ntBASIC18.94■□□□□ 0.62
SLC28A2O43868 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC28A2O43868 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SLC28A2O43868 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC28A2O43868 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC28A2O43868 AC113410.3-201ENST00000623366 203 ntBASIC18.94■□□□□ 0.62
SLC28A2O43868 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.94■□□□□ 0.62
SLC28A2O43868 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC28A2O43868 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC28A2O43868 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC28A2O43868 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC28A2O43868 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms