Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TFP1-202ENST00000475455 1573 ntBASIC17.58■□□□□ 0.41
TRAF3IP2O43734 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF3IP2O43734 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF3IP2O43734 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 AC008403.3-201ENST00000598924 454 ntBASIC17.56■□□□□ 0.4
TRAF3IP2O43734 AL121906.2-201ENST00000621597 723 ntBASIC17.56■□□□□ 0.4
TRAF3IP2O43734 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAF3IP2O43734 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
TRAF3IP2O43734 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRAF3IP2O43734 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms