Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 EEF1DP3-203ENST00000566025 782 ntBASIC18.73■□□□□ 0.59
PDLIM1O00151 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDLIM1O00151 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM1O00151 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM1O00151 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDLIM1O00151 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
PDLIM1O00151 DPP3P2-201ENST00000416030 1696 ntBASIC18.73■□□□□ 0.59
PDLIM1O00151 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDLIM1O00151 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDLIM1O00151 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDLIM1O00151 AC022517.1-201ENST00000592429 346 ntBASIC18.72■□□□□ 0.59
PDLIM1O00151 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM1O00151 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.72■□□□□ 0.59
PDLIM1O00151 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDLIM1O00151 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM1O00151 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM1O00151 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDLIM1O00151 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM1O00151 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM1O00151 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM1O00151 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.71■□□□□ 0.59
PDLIM1O00151 AC053503.5-201ENST00000601508 636 ntBASIC18.71■□□□□ 0.59
PDLIM1O00151 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM1O00151 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDLIM1O00151 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM1O00151 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM1O00151 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDLIM1O00151 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDLIM1O00151 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDLIM1O00151 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDLIM1O00151 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.7■□□□□ 0.58
PDLIM1O00151 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.7■□□□□ 0.58
PDLIM1O00151 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.7■□□□□ 0.58
PDLIM1O00151 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.7■□□□□ 0.58
PDLIM1O00151 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 RARRES2P11-201ENST00000635158 484 ntBASIC18.7■□□□□ 0.58
PDLIM1O00151 BX119927.1-201ENST00000636596 1552 ntBASIC18.7■□□□□ 0.58
PDLIM1O00151 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDLIM1O00151 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM1O00151 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM1O00151 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PDLIM1O00151 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM1O00151 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM1O00151 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms