Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 PTBP1P-201ENST00000554374 1601 ntBASIC16.82■□□□□ 0.28
TMEM235A6NFC5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM235A6NFC5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM235A6NFC5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 TERF1P2-201ENST00000583350 1212 ntBASIC16.8■□□□□ 0.28
TMEM235A6NFC5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM235A6NFC5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM235A6NFC5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms