Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM49BA6NDI0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 NCF1B-203ENST00000435988 1254 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 TSPY6P-201ENST00000448518 926 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 AC091874.3-201ENST00000512672 1195 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 AC092118.2-201ENST00000613495 667 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 AP000974.1-201ENST00000623909 2387 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 AC124283.5-201ENST00000624661 1809 ntBASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM49BA6NDI0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM49BA6NDI0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM49BA6NDI0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 AC116351.2-201ENST00000606540 1585 ntBASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 AC098934.4-201ENST00000564127 592 ntBASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 AC018445.3-201ENST00000624177 1945 ntBASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM49BA6NDI0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 AC006557.6-201ENST00000623071 864 ntBASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM49BA6NDI0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM49BA6NDI0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms