Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 KRT18P61-201ENST00000585825 1298 ntBASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 MFSD11-216ENST00000590393 1141 ntBASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 AC016405.3-201ENST00000607710 860 ntBASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 AC098818.2-201ENST00000564925 2320 ntBASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 Z82202.1-201ENST00000623446 1880 ntBASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV21A0A0B4J279 AP000974.1-201ENST00000623909 2387 ntBASIC14.65□□□□□ -0.07
TRAV21A0A0B4J279 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 AC034268.1-201ENST00000441047 882 ntBASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 AC105020.6-201ENST00000621523 1217 ntBASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 RNF165-205ENST00000588679 2904 ntBASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV21A0A0B4J279 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 ZNRF2P3-201ENST00000424200 374 ntBASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 RARRES2P4-201ENST00000514074 484 ntBASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV21A0A0B4J279 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms