Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC004408.2-201ENST00000623613 2777 ntBASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC005332.7-201ENST00000614046 2005 ntBASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CDV3P1-201ENST00000471403 739 ntBASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 AC093484.2-201ENST00000580996 2166 ntBASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV13-1A0A0B4J241 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 AC026471.1-201ENST00000564629 3026 ntBASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 AC027612.3-201ENST00000413684 1047 ntBASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 KRT18P20-201ENST00000548986 1279 ntBASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 TERF1P2-201ENST00000583350 1212 ntBASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV13-1A0A0B4J241 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 PGM5P4-201ENST00000421970 445 ntBASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 AC243732.1-201ENST00000612648 864 ntBASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TRAV13-1A0A0B4J241 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 RBM17P2-201ENST00000616397 1405 ntBASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV13-1A0A0B4J241 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms