Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF16-201ENST00000276816 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ETF1-201ENST00000360541 3742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RNVU1-3-201ENST00000364313 161 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 Y_RNA.290-201ENST00000364879 114 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 SNORA29-201ENST00000384183 140 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL590762.2-201ENST00000395798 571 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU2-5P-201ENST00000410533 180 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RNA5SP475-201ENST00000410568 110 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FXNP2-201ENST00000411625 547 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL135786.1-201ENST00000415892 214 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC074085.2-201ENST00000416734 428 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 NME6-208ENST00000435684 599 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL627082.1-201ENST00000443847 235 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 COX7CP1-201ENST00000446556 192 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL354714.3-201ENST00000447284 493 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL10AP3-201ENST00000462503 651 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC090515.1-201ENST00000465295 476 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL30P12-201ENST00000474666 353 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL12P32-201ENST00000484010 494 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RNU2-12P-201ENST00000517216 168 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 IGKV3-31-201ENST00000523109 329 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MBP-228ENST00000527041 582 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FTH1-205ENST00000529631 507 ntTSL 4 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC138466.2-201ENST00000540993 304 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 COG4-212ENST00000564653 590 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC022254.1-201ENST00000567857 235 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AF254982.1-201ENST00000611755 311 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 STRADA-224ENST00000617949 705 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL096814.1-201ENST00000623004 580 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 TPRXL-213ENST00000636198 651 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A3P-201ENST00000506444 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A4P-201ENST00000509856 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A18P-201ENST00000527117 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A20P-201ENST00000528221 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A10P-201ENST00000530206 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM90A19P-201ENST00000533611 1395 ntBASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PRMT2-205ENST00000397637 2880 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 POLDIP3-205ENST00000451060 3491 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 LRP5L-208ENST00000610821 3602 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PCDHGA11-203ENST00000622044 3633 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 GOLGA2P5-202ENST00000304813 3105 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 TEKT3-201ENST00000338696 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP3-3Q9BYR6 CHAMP1-201ENST00000361283 3795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
KRTAP3-3Q9BYR6 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms