RNA–Protein interactions for RNA: ENST00000451060.6

POLDIP3-205, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 2 BASIC

Gene POLDIP3, Length 3,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-205ENST00000451060 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
POLDIP3-205ENST00000451060 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
POLDIP3-205ENST00000451060 SUPT5HO00267 1087 aaKnown RBP19.17■□□□□ 0.66
POLDIP3-205ENST00000451060 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
POLDIP3-205ENST00000451060 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
POLDIP3-205ENST00000451060 HRCP23327 699 aa18.61■□□□□ 0.57
POLDIP3-205ENST00000451060 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
POLDIP3-205ENST00000451060 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
POLDIP3-205ENST00000451060 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
POLDIP3-205ENST00000451060 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
POLDIP3-205ENST00000451060 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
POLDIP3-205ENST00000451060 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
POLDIP3-205ENST00000451060 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
POLDIP3-205ENST00000451060 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
POLDIP3-205ENST00000451060 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
POLDIP3-205ENST00000451060 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
POLDIP3-205ENST00000451060 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
POLDIP3-205ENST00000451060 ABCC9O60706 1549 aa17.62■□□□□ 0.41
POLDIP3-205ENST00000451060 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
POLDIP3-205ENST00000451060 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
POLDIP3-205ENST00000451060 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
POLDIP3-205ENST00000451060 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
POLDIP3-205ENST00000451060 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
POLDIP3-205ENST00000451060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
POLDIP3-205ENST00000451060 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
POLDIP3-205ENST00000451060 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
POLDIP3-205ENST00000451060 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
POLDIP3-205ENST00000451060 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
POLDIP3-205ENST00000451060 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
POLDIP3-205ENST00000451060 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
POLDIP3-205ENST00000451060 WIZO95785 1651 aa17.14■□□□□ 0.33
POLDIP3-205ENST00000451060 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
POLDIP3-205ENST00000451060 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
POLDIP3-205ENST00000451060 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
POLDIP3-205ENST00000451060 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
POLDIP3-205ENST00000451060 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
POLDIP3-205ENST00000451060 NACADO15069 1562 aa16.9■□□□□ 0.3
POLDIP3-205ENST00000451060 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
POLDIP3-205ENST00000451060 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
POLDIP3-205ENST00000451060 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
POLDIP3-205ENST00000451060 SOGA1O94964 1423 aa16.88■□□□□ 0.29
POLDIP3-205ENST00000451060 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
POLDIP3-205ENST00000451060 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
POLDIP3-205ENST00000451060 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
POLDIP3-205ENST00000451060 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
POLDIP3-205ENST00000451060 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
POLDIP3-205ENST00000451060 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
POLDIP3-205ENST00000451060 ZNF316A6NFI3 1004 aaPredicted RBP16.76■□□□□ 0.27
POLDIP3-205ENST00000451060 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
POLDIP3-205ENST00000451060 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
POLDIP3-205ENST00000451060 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
POLDIP3-205ENST00000451060 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
POLDIP3-205ENST00000451060 MIER1Q8N108 512 aa16.69■□□□□ 0.26
POLDIP3-205ENST00000451060 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
POLDIP3-205ENST00000451060 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
POLDIP3-205ENST00000451060 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
POLDIP3-205ENST00000451060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
POLDIP3-205ENST00000451060 EEA1Q15075 1411 aa16.53■□□□□ 0.24
POLDIP3-205ENST00000451060 CLIP1P30622 1438 aa16.49■□□□□ 0.23
POLDIP3-205ENST00000451060 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
POLDIP3-205ENST00000451060 APLP2Q06481 763 aa16.45■□□□□ 0.22
POLDIP3-205ENST00000451060 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
POLDIP3-205ENST00000451060 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
POLDIP3-205ENST00000451060 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
POLDIP3-205ENST00000451060 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.22
POLDIP3-205ENST00000451060 KIF21BO75037 1637 aa16.33■□□□□ 0.21
POLDIP3-205ENST00000451060 MYT1Q01538 1121 aa16.31■□□□□ 0.2
POLDIP3-205ENST00000451060 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
POLDIP3-205ENST00000451060 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
POLDIP3-205ENST00000451060 ITGAEP38570 1179 aa16.25■□□□□ 0.19
POLDIP3-205ENST00000451060 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
POLDIP3-205ENST00000451060 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
POLDIP3-205ENST00000451060 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
POLDIP3-205ENST00000451060 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
POLDIP3-205ENST00000451060 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
POLDIP3-205ENST00000451060 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
POLDIP3-205ENST00000451060 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
POLDIP3-205ENST00000451060 BCANQ96GW7 911 aa16.1■□□□□ 0.17
POLDIP3-205ENST00000451060 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
POLDIP3-205ENST00000451060 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
POLDIP3-205ENST00000451060 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
POLDIP3-205ENST00000451060 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
POLDIP3-205ENST00000451060 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
POLDIP3-205ENST00000451060 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.16
POLDIP3-205ENST00000451060 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
POLDIP3-205ENST00000451060 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
POLDIP3-205ENST00000451060 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
POLDIP3-205ENST00000451060 RAB3GAP2Q9H2M9 1393 aa15.99■□□□□ 0.15
POLDIP3-205ENST00000451060 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
POLDIP3-205ENST00000451060 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
POLDIP3-205ENST00000451060 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
POLDIP3-205ENST00000451060 CUX1P39880 1505 aa15.95■□□□□ 0.14
POLDIP3-205ENST00000451060 FKBP8Q14318 412 aa15.94■□□□□ 0.14
POLDIP3-205ENST00000451060 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
POLDIP3-205ENST00000451060 MAPKBP1O60336 1514 aa15.92■□□□□ 0.14
POLDIP3-205ENST00000451060 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
POLDIP3-205ENST00000451060 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
POLDIP3-205ENST00000451060 CUX2O14529 1486 aa15.91■□□□□ 0.14
POLDIP3-205ENST00000451060 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
POLDIP3-205ENST00000451060 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms