Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL603755.1-201ENST00000619504 163 ntBASIC7.76□□□□□ -1.17
SYNGAP1Q96PV0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.76□□□□□ -1.17
SYNGAP1Q96PV0 CASC19-232ENST00000641480 1244 ntBASIC7.76□□□□□ -1.17
SYNGAP1Q96PV0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNGAP1Q96PV0 ZNF806-201ENST00000438300 1774 ntBASIC7.76□□□□□ -1.17
SYNGAP1Q96PV0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AL031123.3-201ENST00000623345 1837 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC092111.1-201ENST00000618256 3358 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RNU6-1242P-201ENST00000391052 103 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RNA5SP474-201ENST00000391234 90 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 MIR937-201ENST00000401271 86 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RPL12P23-201ENST00000405880 490 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RN7SKP232-201ENST00000410170 290 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RN7SKP240-201ENST00000410583 375 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RNU4-22P-201ENST00000411058 166 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RNA5SP115-201ENST00000411160 107 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC245060.4-201ENST00000413293 1121 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 GAPDHP57-201ENST00000424400 585 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 NPM1P26-201ENST00000426339 738 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RPL12P16-201ENST00000431098 498 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 NPM1P13-201ENST00000452663 865 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SBDSP1-204ENST00000453858 737 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 MEF2AP1-201ENST00000454867 863 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC092754.2-201ENST00000463506 460 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 NDUFA5P5-201ENST00000468361 342 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC083806.1-201ENST00000468934 316 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC091951.3-201ENST00000504093 246 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 HPRT1P1-201ENST00000509498 657 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC147055.3-201ENST00000510547 851 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 OR4A2P-201ENST00000527276 913 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 ZDHHC20P3-201ENST00000531576 336 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RFPL1S-203ENST00000539579 330 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC140063.1-201ENST00000541343 259 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC023827.2-201ENST00000566880 1061 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC027281.1-201ENST00000574178 758 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 RN7SL230P-201ENST00000580835 303 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC012368.3-201ENST00000604190 219 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC015849.2-201ENST00000605738 409 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC004241.2-201ENST00000614562 444 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC096708.4-201ENST00000620563 552 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 AC132825.8-201ENST00000640783 297 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 CASC19-274ENST00000642018 970 ntBASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNGAP1Q96PV0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 SPATA31C2-201ENST00000324915 3777 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC132219.2-201ENST00000624416 2327 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL356473.1-201ENST00000406203 1408 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 SGO1P1-201ENST00000603525 1447 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms