Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 RSL24D1P2-201ENST00000445584 366 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC108103.1-201ENST00000511286 446 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 RN7SKP248-201ENST00000516278 305 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 NPIPB14P-203ENST00000532298 987 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC090115.2-201ENST00000548060 883 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC100814.1-201ENST00000606963 623 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC009779.8-202ENST00000607990 932 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC006924.1-201ENST00000610750 559 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC010998.3-201ENST00000613871 631 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 AL359976.1-201ENST00000418655 3528 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 PPBPP2-201ENST00000513150 1362 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 LYARP1-201ENST00000436977 1501 ntBASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP54Q7Z3B4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 MIR188-201ENST00000385034 86 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL451046.1-201ENST00000406097 534 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 EEF1B2P3-201ENST00000447718 678 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 OR7E22P-201ENST00000478335 1035 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC095052.1-201ENST00000509955 863 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 RNA5SP206-201ENST00000516703 121 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 RN7SKP183-201ENST00000517169 324 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL078601.3-201ENST00000573303 535 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL135999.3-201ENST00000610501 812 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL162377.2-201ENST00000624532 337 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 CASC19-274ENST00000642018 970 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 GUCY1B2-204ENST00000531898 1979 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AL731532.1-201ENST00000623972 4236 ntBASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP54Q7Z3B4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC093775.1-201ENST00000624154 1868 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 HMGB3P7-201ENST00000400214 611 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 RN7SKP121-201ENST00000410842 305 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 RN7SKP144-201ENST00000411108 279 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 PPIAP10-201ENST00000438675 458 ntBASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP54Q7Z3B4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 731.4 ms