Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC9.48□□□□□ -0.89
ATN1P54259 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ATN1P54259 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ATN1P54259 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC9.48□□□□□ -0.89
ATN1P54259 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
ATN1P54259 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
ATN1P54259 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 AC093775.1-201ENST00000624154 1868 ntBASIC9.47□□□□□ -0.89
ATN1P54259 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 SNORA71D-201ENST00000363484 134 ntBASIC9.47□□□□□ -0.89
ATN1P54259 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 NFIB-202ENST00000380924 840 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 SAR1AP2-201ENST00000392696 594 ntBASIC9.47□□□□□ -0.89
ATN1P54259 MORF4L1P1-201ENST00000404582 967 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC9.47□□□□□ -0.89
ATN1P54259 AC130472.1-201ENST00000427885 309 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 AL132765.1-201ENST00000434165 553 ntBASIC9.47□□□□□ -0.89
ATN1P54259 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 AC107399.1-201ENST00000451226 265 ntBASIC9.47□□□□□ -0.89
ATN1P54259 MRPS31P2-201ENST00000451581 518 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC9.47□□□□□ -0.89
ATN1P54259 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC9.47□□□□□ -0.89
ATN1P54259 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 RN7SL815P-201ENST00000470970 290 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC105910.1-201ENST00000482585 483 ntBASIC9.47□□□□□ -0.89
ATN1P54259 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC9.47□□□□□ -0.89
ATN1P54259 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 RNA5SP216-201ENST00000516111 123 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC9.47□□□□□ -0.89
ATN1P54259 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.47□□□□□ -0.89
ATN1P54259 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 HMGN1P30-201ENST00000589286 268 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 CKS1BP3-201ENST00000600888 237 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AL390058.1-201ENST00000603834 629 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC004890.3-201ENST00000605566 1095 ntBASIC9.47□□□□□ -0.89
ATN1P54259 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 AC024023.1-201ENST00000624530 922 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC009161.2-201ENST00000624626 138 ntBASIC9.47□□□□□ -0.89
ATN1P54259 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 MFF-206ENST00000392059 1710 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 USP44-208ENST00000552440 1818 ntTSL 5 BASIC9.47□□□□□ -0.89
ATN1P54259 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.47□□□□□ -0.89
ATN1P54259 NF1P8-201ENST00000415351 1461 ntBASIC9.47□□□□□ -0.89
ATN1P54259 AC010200.1-201ENST00000547380 1454 ntBASIC9.47□□□□□ -0.89
ATN1P54259 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ATN1P54259 Z95114.3-201ENST00000624395 1921 ntBASIC9.46□□□□□ -0.89
ATN1P54259 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ATN1P54259 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ATN1P54259 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
ATN1P54259 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ATN1P54259 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
ATN1P54259 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
ATN1P54259 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC9.46□□□□□ -0.89
ATN1P54259 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.89
ATN1P54259 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.46□□□□□ -0.89
ATN1P54259 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ATN1P54259 Y_RNA.80-201ENST00000362996 102 ntBASIC9.46□□□□□ -0.9
ATN1P54259 RNU6-432P-201ENST00000384196 109 ntBASIC9.46□□□□□ -0.9
ATN1P54259 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
ATN1P54259 AL136116.1-201ENST00000403591 381 ntBASIC9.46□□□□□ -0.9
ATN1P54259 OR2AS1P-201ENST00000427827 319 ntBASIC9.46□□□□□ -0.9
ATN1P54259 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms