Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 RNA5SP350-201ENST00000363298 111 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 PTCD2P2-201ENST00000415579 1095 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 OR52B5P-201ENST00000435337 951 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 SCAND3P1-201ENST00000439854 1060 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC004453.1-201ENST00000487895 408 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC009120.1-201ENST00000493458 473 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC026688.1-201ENST00000520639 1168 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.93□□□□□ -1.3
POLR2AP24928 AL139022.2-201ENST00000606934 443 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.93□□□□□ -1.3
POLR2AP24928 AC012254.5-201ENST00000623573 478 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 AC003992.1-201ENST00000635364 557 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 OR52B5P-202ENST00000641118 1110 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
POLR2AP24928 AC105749.1-201ENST00000631338 2008 ntBASIC6.93□□□□□ -1.3
POLR2AP24928 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.93□□□□□ -1.3
POLR2AP24928 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 AC016583.1-201ENST00000624221 2431 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
POLR2AP24928 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
POLR2AP24928 OR5W1P-201ENST00000423705 938 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.92□□□□□ -1.3
POLR2AP24928 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.92□□□□□ -1.3
POLR2AP24928 AL450023.1-201ENST00000450868 751 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 TPRKBP1-201ENST00000456243 481 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 FCF1P6-201ENST00000456841 595 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 OR13C1P-201ENST00000457612 963 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 RPL35AP28-201ENST00000459730 331 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.92□□□□□ -1.3
POLR2AP24928 RN7SL808P-201ENST00000496066 299 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 AC093890.1-201ENST00000502554 540 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.92□□□□□ -1.3
POLR2AP24928 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.92□□□□□ -1.3
POLR2AP24928 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.92□□□□□ -1.3
POLR2AP24928 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.92□□□□□ -1.3
POLR2AP24928 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.92□□□□□ -1.3
POLR2AP24928 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
POLR2AP24928 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.92□□□□□ -1.3
POLR2AP24928 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
POLR2AP24928 AC079753.1-201ENST00000623243 3868 ntBASIC6.92□□□□□ -1.3
POLR2AP24928 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
POLR2AP24928 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
POLR2AP24928 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
POLR2AP24928 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC019205.1-201ENST00000421830 730 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 PSMD10P3-201ENST00000437000 448 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
POLR2AP24928 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.91□□□□□ -1.3
POLR2AP24928 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 AC098826.2-201ENST00000452011 651 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 OR52A4P-202ENST00000481634 799 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 COL6A4P2-205ENST00000509855 506 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 OR7E158P-201ENST00000524483 910 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.91□□□□□ -1.3
POLR2AP24928 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC6.91□□□□□ -1.3
POLR2AP24928 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.91□□□□□ -1.3
POLR2AP24928 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.91□□□□□ -1.3
POLR2AP24928 OR52B5P-204ENST00000641744 3467 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 AL163152.1-201ENST00000642001 374 ntBASIC6.91□□□□□ -1.3
POLR2AP24928 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
POLR2AP24928 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
POLR2AP24928 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms