Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-CQ95604 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-CQ95604 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC007998.4-201ENST00000612496 2533 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 MIR135B-201ENST00000362189 97 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 RNU6-433P-201ENST00000363216 104 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 RNU6-1103P-201ENST00000384150 107 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-CQ95604 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AL662791.3-201ENST00000413771 776 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC006065.1-201ENST00000422539 802 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AL356583.2-201ENST00000426536 280 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 HSPE1P22-201ENST00000456856 327 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC019084.1-201ENST00000457337 432 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC022364.2-201ENST00000457963 554 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC044810.1-201ENST00000480271 711 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC106822.1-201ENST00000502647 526 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC008629.2-201ENST00000503783 483 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 CDC42P3-201ENST00000518493 633 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC089998.3-201ENST00000549715 493 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AL512360.1-201ENST00000555346 234 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 DNM1P33-201ENST00000565222 270 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 IGLJCOR18-201ENST00000584002 424 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC068802.1-201ENST00000603420 732 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC113143.2-201ENST00000603849 394 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AC005070.2-201ENST00000604391 260 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AL136139.1-201ENST00000605568 222 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 COX6CP4-201ENST00000605798 228 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 AP001437.1-201ENST00000608783 456 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-CQ95604 OR7E11P-202ENST00000642027 1491 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.24□□□□□ -1.09
HLA-CQ95604 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
HLA-CQ95604 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC8.24□□□□□ -1.09
HLA-CQ95604 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
HLA-CQ95604 VEZF1P1-201ENST00000423931 1541 ntBASIC8.24□□□□□ -1.09
HLA-CQ95604 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 RNU6-1085P-201ENST00000363576 107 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 RN7SKP48-201ENST00000365031 328 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms