RNA–Protein interactions for RNA: ENST00000535690.1

HOMER1-205, Transcript of homer scaffold protein 1, humanhuman

TSL 1 (best) BASIC

Gene HOMER1, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-205ENST00000535690 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
HOMER1-205ENST00000535690 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
HOMER1-205ENST00000535690 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
HOMER1-205ENST00000535690 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
HOMER1-205ENST00000535690 FOXD1Q16676 465 aa18.1■□□□□ 0.49
HOMER1-205ENST00000535690 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
HOMER1-205ENST00000535690 MSH5O43196 834 aa16.98■□□□□ 0.31
HOMER1-205ENST00000535690 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
HOMER1-205ENST00000535690 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
HOMER1-205ENST00000535690 ADRA2BP18089 450 aa16.84■□□□□ 0.29
HOMER1-205ENST00000535690 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
HOMER1-205ENST00000535690 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
HOMER1-205ENST00000535690 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
HOMER1-205ENST00000535690 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
HOMER1-205ENST00000535690 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
HOMER1-205ENST00000535690 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
HOMER1-205ENST00000535690 HOXD11P31277 338 aaPredicted RBP14.82□□□□□ -0.04
HOMER1-205ENST00000535690 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
HOMER1-205ENST00000535690 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
HOMER1-205ENST00000535690 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
HOMER1-205ENST00000535690 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
HOMER1-205ENST00000535690 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
HOMER1-205ENST00000535690 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
HOMER1-205ENST00000535690 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
HOMER1-205ENST00000535690 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
HOMER1-205ENST00000535690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.151e-6■■□□□ 11.7
HOMER1-205ENST00000535690 KCNA4P22459 653 aa14.02□□□□□ -0.17
HOMER1-205ENST00000535690 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
HOMER1-205ENST00000535690 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
HOMER1-205ENST00000535690 CAPN15O75808 1086 aa13.63□□□□□ -0.23
HOMER1-205ENST00000535690 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
HOMER1-205ENST00000535690 DSG3P32926 999 aa13.53□□□□□ -0.24
HOMER1-205ENST00000535690 APLP2Q06481 763 aa13.48□□□□□ -0.25
HOMER1-205ENST00000535690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
HOMER1-205ENST00000535690 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
HOMER1-205ENST00000535690 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
HOMER1-205ENST00000535690 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
HOMER1-205ENST00000535690 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
HOMER1-205ENST00000535690 ABCB7O75027 752 aa13.3□□□□□ -0.28
HOMER1-205ENST00000535690 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
HOMER1-205ENST00000535690 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
HOMER1-205ENST00000535690 POTEHQ6S545 545 aa13.16□□□□□ -0.3
HOMER1-205ENST00000535690 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
HOMER1-205ENST00000535690 POLA2Q14181 598 aa13.01□□□□□ -0.33
HOMER1-205ENST00000535690 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
HOMER1-205ENST00000535690 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
HOMER1-205ENST00000535690 ZBTB22O15209 634 aa12.88□□□□□ -0.35
HOMER1-205ENST00000535690 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
HOMER1-205ENST00000535690 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
HOMER1-205ENST00000535690 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
HOMER1-205ENST00000535690 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
HOMER1-205ENST00000535690 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
HOMER1-205ENST00000535690 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
HOMER1-205ENST00000535690 FBLN2P98095 1184 aa12.46□□□□□ -0.41
HOMER1-205ENST00000535690 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
HOMER1-205ENST00000535690 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
HOMER1-205ENST00000535690 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
HOMER1-205ENST00000535690 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
HOMER1-205ENST00000535690 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
HOMER1-205ENST00000535690 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
HOMER1-205ENST00000535690 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
HOMER1-205ENST00000535690 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
HOMER1-205ENST00000535690 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
HOMER1-205ENST00000535690 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
HOMER1-205ENST00000535690 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
HOMER1-205ENST00000535690 HAX1O00165 279 aa12.18□□□□□ -0.46
HOMER1-205ENST00000535690 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
HOMER1-205ENST00000535690 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
HOMER1-205ENST00000535690 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
HOMER1-205ENST00000535690 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
HOMER1-205ENST00000535690 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
HOMER1-205ENST00000535690 EVX2Q03828 476 aa11.96□□□□□ -0.49
HOMER1-205ENST00000535690 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
HOMER1-205ENST00000535690 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
HOMER1-205ENST00000535690 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
HOMER1-205ENST00000535690 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
HOMER1-205ENST00000535690 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
HOMER1-205ENST00000535690 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
HOMER1-205ENST00000535690 GABBR2O75899 941 aa11.69□□□□□ -0.54
HOMER1-205ENST00000535690 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
HOMER1-205ENST00000535690 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
HOMER1-205ENST00000535690 CLCN6P51797 869 aa11.51□□□□□ -0.57
HOMER1-205ENST00000535690 LHX8Q68G74 356 aa11.5□□□□□ -0.57
HOMER1-205ENST00000535690 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
HOMER1-205ENST00000535690 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
HOMER1-205ENST00000535690 PROM2Q8N271 834 aa11.47□□□□□ -0.57
HOMER1-205ENST00000535690 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
HOMER1-205ENST00000535690 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
HOMER1-205ENST00000535690 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
HOMER1-205ENST00000535690 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
HOMER1-205ENST00000535690 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
HOMER1-205ENST00000535690 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
HOMER1-205ENST00000535690 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
HOMER1-205ENST00000535690 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
HOMER1-205ENST00000535690 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
HOMER1-205ENST00000535690 MIER1Q8N108 512 aa11.2□□□□□ -0.62
HOMER1-205ENST00000535690 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
HOMER1-205ENST00000535690 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
HOMER1-205ENST00000535690 FKBP8Q14318 412 aa11.15□□□□□ -0.62
HOMER1-205ENST00000535690 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms