Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKDCP78527 AC009166.2-201ENST00000624410 2833 ntBASIC4.01□□□□□ -1.77
PRKDCP78527 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PRKDCP78527 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 AC068870.1-201ENST00000563737 2455 ntBASIC4□□□□□ -1.77
PRKDCP78527 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRKDCP78527 GPS2P1-201ENST00000411761 986 ntBASIC4□□□□□ -1.77
PRKDCP78527 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 AC091390.2-201ENST00000432573 374 ntBASIC4□□□□□ -1.77
PRKDCP78527 AC008147.3-201ENST00000548666 354 ntBASIC4□□□□□ -1.77
PRKDCP78527 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 MIR4311-201ENST00000580794 100 ntBASIC4□□□□□ -1.77
PRKDCP78527 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 AC093227.2-201ENST00000589357 285 ntBASIC4□□□□□ -1.77
PRKDCP78527 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRKDCP78527 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 AL034546.1-201ENST00000623740 3693 ntBASIC4□□□□□ -1.77
PRKDCP78527 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRKDCP78527 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 AL122126.1-201ENST00000546905 1318 ntBASIC4□□□□□ -1.77
PRKDCP78527 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 SNORA84-201ENST00000459229 133 ntBASIC4□□□□□ -1.77
PRKDCP78527 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 OR8G5-201ENST00000524943 1041 ntBASIC4□□□□□ -1.77
PRKDCP78527 OR4A40P-201ENST00000533878 948 ntBASIC4□□□□□ -1.77
PRKDCP78527 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
PRKDCP78527 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 AC110048.2-201ENST00000617013 6721 ntBASIC4□□□□□ -1.77
PRKDCP78527 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4□□□□□ -1.77
PRKDCP78527 RN7SKP149-201ENST00000363008 344 ntBASIC4□□□□□ -1.77
PRKDCP78527 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4□□□□□ -1.77
PRKDCP78527 AC093655.2-201ENST00000425735 631 ntBASIC4□□□□□ -1.77
PRKDCP78527 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 AC093414.1-201ENST00000434712 514 ntBASIC4□□□□□ -1.77
PRKDCP78527 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 AL022237.1-201ENST00000446663 358 ntBASIC4□□□□□ -1.77
PRKDCP78527 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4□□□□□ -1.77
PRKDCP78527 CR383656.1-201ENST00000484916 377 ntBASIC4□□□□□ -1.77
PRKDCP78527 HMGB1P44-201ENST00000508597 572 ntBASIC4□□□□□ -1.77
PRKDCP78527 MIR2117-201ENST00000516780 80 ntBASIC4□□□□□ -1.77
PRKDCP78527 MIR4691-201ENST00000583764 85 ntBASIC4□□□□□ -1.77
PRKDCP78527 AP005432.2-201ENST00000608162 586 ntBASIC4□□□□□ -1.77
PRKDCP78527 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PRKDCP78527 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 CPS1-IT1-201ENST00000628368 2306 ntBASIC4□□□□□ -1.77
PRKDCP78527 SALL4P7-201ENST00000555779 3120 ntBASIC4□□□□□ -1.77
PRKDCP78527 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKDCP78527 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKDCP78527 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 RNA5SP113-201ENST00000410486 84 ntBASIC3.99□□□□□ -1.77
PRKDCP78527 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKDCP78527 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKDCP78527 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKDCP78527 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKDCP78527 AC008785.1-201ENST00000624475 456 ntBASIC3.99□□□□□ -1.77
PRKDCP78527 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PRKDCP78527 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
PRKDCP78527 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRKDCP78527 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKDCP78527 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms