Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL683826.1-201ENST00000624104 627 ntBASIC6.29□□□□□ -1.4
PER3P56645 AC063952.1-203ENST00000634410 658 ntBASIC6.29□□□□□ -1.4
PER3P56645 AL139254.2-202ENST00000641937 1156 ntBASIC6.29□□□□□ -1.4
PER3P56645 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.29□□□□□ -1.4
PER3P56645 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.29□□□□□ -1.4
PER3P56645 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.29□□□□□ -1.4
PER3P56645 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PER3P56645 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.28□□□□□ -1.4
PER3P56645 AKAP17BP-201ENST00000431706 2719 ntBASIC6.28□□□□□ -1.4
PER3P56645 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.28□□□□□ -1.4
PER3P56645 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 RN7SKP130-201ENST00000364924 301 ntBASIC6.28□□□□□ -1.4
PER3P56645 MTCO2P21-201ENST00000419780 677 ntBASIC6.28□□□□□ -1.4
PER3P56645 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.28□□□□□ -1.4
PER3P56645 RPL12P28-201ENST00000430852 489 ntBASIC6.28□□□□□ -1.4
PER3P56645 RPSAP32-201ENST00000432681 526 ntBASIC6.28□□□□□ -1.4
PER3P56645 MTCYBP31-201ENST00000438855 1122 ntBASIC6.28□□□□□ -1.4
PER3P56645 RPSAP40-201ENST00000442343 891 ntBASIC6.28□□□□□ -1.4
PER3P56645 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.28□□□□□ -1.4
PER3P56645 CCNJP2-201ENST00000457810 1163 ntBASIC6.28□□□□□ -1.4
PER3P56645 RN7SL88P-201ENST00000480166 299 ntBASIC6.28□□□□□ -1.4
PER3P56645 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 RPL21P47-201ENST00000483696 477 ntBASIC6.28□□□□□ -1.4
PER3P56645 MTCO3P35-201ENST00000485582 781 ntBASIC6.28□□□□□ -1.4
PER3P56645 AP005202.1-201ENST00000489915 867 ntBASIC6.28□□□□□ -1.4
PER3P56645 RPL5P23-201ENST00000496040 868 ntBASIC6.28□□□□□ -1.4
PER3P56645 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.28□□□□□ -1.4
PER3P56645 AC011853.1-201ENST00000518911 454 ntBASIC6.28□□□□□ -1.4
PER3P56645 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.28□□□□□ -1.4
PER3P56645 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.28□□□□□ -1.4
PER3P56645 AC106734.1-201ENST00000568646 663 ntBASIC6.28□□□□□ -1.4
PER3P56645 SNX6P1-201ENST00000601728 1224 ntBASIC6.28□□□□□ -1.4
PER3P56645 AC079315.1-201ENST00000602952 623 ntBASIC6.28□□□□□ -1.4
PER3P56645 AL499605.1-201ENST00000604628 403 ntBASIC6.28□□□□□ -1.4
PER3P56645 AC093635.1-201ENST00000609028 555 ntBASIC6.28□□□□□ -1.4
PER3P56645 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PER3P56645 VN1R9P-201ENST00000614184 867 ntBASIC6.28□□□□□ -1.4
PER3P56645 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.28□□□□□ -1.4
PER3P56645 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.28□□□□□ -1.4
PER3P56645 SAMM50P1-201ENST00000455403 1399 ntBASIC6.28□□□□□ -1.4
PER3P56645 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PER3P56645 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PER3P56645 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.27□□□□□ -1.4
PER3P56645 FBXL21-201ENST00000297158 1305 ntBASIC6.27□□□□□ -1.41
PER3P56645 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
PER3P56645 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.27□□□□□ -1.41
PER3P56645 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
PER3P56645 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.27□□□□□ -1.41
PER3P56645 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 ZNF402P-201ENST00000404435 3100 ntBASIC6.27□□□□□ -1.41
PER3P56645 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PER3P56645 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PER3P56645 RNA5SP435-201ENST00000364044 108 ntBASIC6.27□□□□□ -1.41
PER3P56645 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.27□□□□□ -1.41
PER3P56645 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.27□□□□□ -1.41
PER3P56645 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.27□□□□□ -1.41
PER3P56645 RNA5SP122-201ENST00000384457 108 ntBASIC6.27□□□□□ -1.41
PER3P56645 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.27□□□□□ -1.41
PER3P56645 GAPDHP15-201ENST00000398586 975 ntBASIC6.27□□□□□ -1.41
PER3P56645 RBBP4P4-201ENST00000398588 1289 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms