Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 RN7SKP86-201ENST00000410454 332 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 RPL35AP3-201ENST00000414680 288 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AL359885.1-201ENST00000415786 903 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC092651.1-201ENST00000426110 312 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 RPL12P16-201ENST00000431098 498 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 RPS3AP38-201ENST00000435889 763 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC096632.2-201ENST00000438139 1239 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 HMGB1P7-201ENST00000450921 612 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC104164.1-201ENST00000460282 590 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC112484.3-201ENST00000505910 329 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 MAST4-IT1-201ENST00000514241 658 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 RN7SKP288-201ENST00000516227 268 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 snoU109.5-201ENST00000516231 132 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 GTF2IP11-201ENST00000526931 420 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC068768.2-201ENST00000602352 343 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 MAPK10-350ENST00000641777 965 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 AL161912.4-201ENST00000623889 2468 ntBASIC5.24□□□□□ -1.57
HIST1H3AP68431 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIST1H3AP68431 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HIST1H3AP68431 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 RBBP4P5-201ENST00000398583 1266 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 NPM1P37-201ENST00000403105 874 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC097463.1-201ENST00000447288 481 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC090058.1-201ENST00000498788 435 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC018797.1-201ENST00000510791 255 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 OR4A42P-201ENST00000531397 938 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 NPM1P42-201ENST00000560329 862 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC092332.1-201ENST00000563684 829 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 uc_338.26-201ENST00000612659 160 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 FAM27E2-201ENST00000619668 403 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL731532.1-201ENST00000623972 4236 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HIST1H3AP68431 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 MTCO1P28-201ENST00000574177 1528 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 RBPJP7-201ENST00000442803 1447 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 RBPJP5-201ENST00000449433 1447 ntBASIC5.23□□□□□ -1.57
HIST1H3AP68431 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HIST1H3AP68431 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HIST1H3AP68431 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HIST1H3AP68431 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HIST1H3AP68431 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HIST1H3AP68431 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms