Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C1GALT1P3-201ENST00000522049 819 ntBASIC3.51□□□□□ -1.85
APOBP04114 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.51□□□□□ -1.85
APOBP04114 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
APOBP04114 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
APOBP04114 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 AC130304.1-201ENST00000622942 2385 ntBASIC3.51□□□□□ -1.85
APOBP04114 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ABCA11P-202ENST00000504019 2110 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC015977.1-201ENST00000418887 292 ntBASIC3.51□□□□□ -1.85
APOBP04114 TRGV7-201ENST00000427089 353 ntBASIC3.51□□□□□ -1.85
APOBP04114 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 RPS4XP20-201ENST00000505751 772 ntBASIC3.51□□□□□ -1.85
APOBP04114 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.51□□□□□ -1.85
APOBP04114 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.51□□□□□ -1.85
APOBP04114 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.51□□□□□ -1.85
APOBP04114 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 AC002075.1-201ENST00000457396 676 ntBASIC3.5□□□□□ -1.85
APOBP04114 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.5□□□□□ -1.85
APOBP04114 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.5□□□□□ -1.85
APOBP04114 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.5□□□□□ -1.85
APOBP04114 RBM22P12-201ENST00000567098 1255 ntBASIC3.5□□□□□ -1.85
APOBP04114 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.5□□□□□ -1.85
APOBP04114 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
APOBP04114 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
APOBP04114 AL359922.2-201ENST00000581788 3017 ntBASIC3.5□□□□□ -1.85
APOBP04114 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 AC013488.1-201ENST00000526618 1838 ntBASIC3.5□□□□□ -1.85
APOBP04114 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 Z98755.1-201ENST00000407015 1384 ntBASIC3.5□□□□□ -1.85
APOBP04114 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 RPL32P3-201ENST00000359025 275 ntBASIC3.5□□□□□ -1.85
APOBP04114 RNA5SP91-201ENST00000390902 119 ntBASIC3.5□□□□□ -1.85
APOBP04114 MIR541-201ENST00000401360 84 ntBASIC3.5□□□□□ -1.85
APOBP04114 NUDT19P3-201ENST00000404698 555 ntBASIC3.5□□□□□ -1.85
APOBP04114 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 CYP4F29P-201ENST00000420685 446 ntBASIC3.5□□□□□ -1.85
APOBP04114 AC073648.4-201ENST00000442655 781 ntBASIC3.5□□□□□ -1.85
APOBP04114 AC109462.1-201ENST00000491087 368 ntBASIC3.5□□□□□ -1.85
APOBP04114 AC008033.2-201ENST00000542626 177 ntBASIC3.5□□□□□ -1.85
APOBP04114 MIR5095-201ENST00000578844 88 ntBASIC3.5□□□□□ -1.85
APOBP04114 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 LINC01616-201ENST00000561816 2280 ntBASIC3.5□□□□□ -1.85
APOBP04114 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 AC011369.2-201ENST00000624423 1567 ntBASIC3.5□□□□□ -1.85
APOBP04114 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 INTS6P1-201ENST00000504674 2530 ntBASIC3.5□□□□□ -1.85
APOBP04114 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.5□□□□□ -1.85
APOBP04114 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 PRPF38AP2-201ENST00000438179 851 ntBASIC3.5□□□□□ -1.85
APOBP04114 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 IGLV3-24-201ENST00000517477 197 ntBASIC3.5□□□□□ -1.85
APOBP04114 DPPA3P2-202ENST00000557188 1219 ntBASIC3.5□□□□□ -1.85
APOBP04114 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.5□□□□□ -1.85
APOBP04114 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 AC093799.2-201ENST00000610062 578 ntBASIC3.5□□□□□ -1.85
APOBP04114 WBP1LP8-201ENST00000617401 327 ntBASIC3.5□□□□□ -1.85
APOBP04114 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms