Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 NIFKP3-201ENST00000417799 865 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC244502.2-201ENST00000543361 851 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC087783.2-201ENST00000605070 562 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 MIR378J-201ENST00000611988 109 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TOPBP1Q92547 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOPBP1Q92547 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 UGT2B27P-201ENST00000505092 1620 ntBASIC9.65□□□□□ -0.86
TOPBP1Q92547 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 RNVU1-6-201ENST00000364688 164 ntBASIC9.65□□□□□ -0.86
TOPBP1Q92547 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOPBP1Q92547 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 RPL7P6-201ENST00000480903 738 ntBASIC9.65□□□□□ -0.86
TOPBP1Q92547 MGST2-204ENST00000506797 634 ntTSL 2 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 AC137768.1-201ENST00000549998 553 ntBASIC9.65□□□□□ -0.86
TOPBP1Q92547 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TOPBP1Q92547 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 AC024589.2-201ENST00000605642 1294 ntBASIC9.65□□□□□ -0.86
TOPBP1Q92547 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC9.65□□□□□ -0.86
TOPBP1Q92547 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
TOPBP1Q92547 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
TOPBP1Q92547 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.65□□□□□ -0.87
TOPBP1Q92547 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
TOPBP1Q92547 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOPBP1Q92547 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOPBP1Q92547 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
TOPBP1Q92547 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 RN7SKP104-201ENST00000362605 328 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 BZW1P1-201ENST00000454901 1240 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 AC126615.2-201ENST00000553003 515 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 AP002799.1-201ENST00000623552 423 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TOPBP1Q92547 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TOPBP1Q92547 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC9.64□□□□□ -0.87
TOPBP1Q92547 HSPA8P18-201ENST00000439846 1928 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 AL662795.2-201ENST00000624252 3706 ntBASIC9.64□□□□□ -0.87
TOPBP1Q92547 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 THAP12P9-201ENST00000503971 2360 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 RAB28P1-201ENST00000411517 641 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 TPM3P3-201ENST00000521343 354 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 BLZF2P-201ENST00000553776 1130 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 AC027334.1-201ENST00000603257 310 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 TMEM75-201ENST00000624314 2165 ntBASIC9.63□□□□□ -0.87
TOPBP1Q92547 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TOPBP1Q92547 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TOPBP1Q92547 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC022905.1-201ENST00000503430 3048 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOPBP1Q92547 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 RPS11P7-201ENST00000442125 465 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC009220.1-201ENST00000451614 275 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC083982.1-201ENST00000485679 344 ntBASIC9.62□□□□□ -0.87
TOPBP1Q92547 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms