Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC005363.1-201ENST00000530779 351 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXF1Q12946 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 TOMM20P1-201ENST00000534518 427 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AC079905.1-201ENST00000549280 475 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 AC007956.1-201ENST00000555623 542 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXF1Q12946 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AC134669.1-201ENST00000581275 672 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 AL499605.1-201ENST00000604628 403 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 AC108673.3-201ENST00000609183 335 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 CXADRP3-202ENST00000617265 1100 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 AC069234.4-201ENST00000621276 412 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 OR8A1-204ENST00000642111 1145 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
FOXF1Q12946 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
FOXF1Q12946 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
FOXF1Q12946 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXF1Q12946 AC020656.2-201ENST00000613291 5309 ntBASIC5.41□□□□□ -1.54
FOXF1Q12946 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXF1Q12946 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
FOXF1Q12946 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.41□□□□□ -1.54
FOXF1Q12946 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXF1Q12946 CAP1P2-201ENST00000417455 1409 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXF1Q12946 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXF1Q12946 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
FOXF1Q12946 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXF1Q12946 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 RNFT1P3-201ENST00000340898 1052 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC004386.1-201ENST00000393214 761 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 AL354890.1-201ENST00000413730 346 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC099677.3-201ENST00000427081 395 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXF1Q12946 GAPDHP75-201ENST00000433910 943 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 BMS1P10-201ENST00000443754 1120 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 LSM3P4-201ENST00000502948 309 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
FOXF1Q12946 RN7SKP67-201ENST00000515905 235 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 RN7SKP288-201ENST00000516227 268 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 SCARNA18.1-201ENST00000516330 83 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 IGKV2-19-201ENST00000518132 283 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXF1Q12946 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC244502.2-201ENST00000543361 851 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXF1Q12946 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXF1Q12946 HNRNPCP1-201ENST00000556181 766 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AL049779.3-201ENST00000557141 606 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC090826.1-203ENST00000569235 490 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AC005244.1-201ENST00000582566 339 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXF1Q12946 AC090236.2-201ENST00000587933 1101 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 AC009237.12-201ENST00000604755 742 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 MIR6809-201ENST00000612189 116 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.4□□□□□ -1.54
FOXF1Q12946 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
FOXF1Q12946 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXF1Q12946 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 SAMMSON-210ENST00000641260 1308 ntBASIC5.4□□□□□ -1.55
FOXF1Q12946 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXF1Q12946 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXF1Q12946 AC092070.2-203ENST00000598377 3644 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms