Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7□□□□□ -1.29
EPHB3P54753 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
EPHB3P54753 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 MRPS6P2-201ENST00000381143 370 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 RNU6-298P-201ENST00000390888 96 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 TIMM9P2-201ENST00000419324 266 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 MTND4P24-201ENST00000424002 397 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL390023.1-201ENST00000428836 262 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC002069.1-201ENST00000429649 1159 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL138899.2-201ENST00000439139 499 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AL355355.1-201ENST00000442900 793 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 TVP23CP1-201ENST00000450317 639 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 MTND4LP3-201ENST00000468320 276 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 OR7E22P-201ENST00000478335 1035 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL591767.3-201ENST00000554632 525 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AL391156.1-201ENST00000554965 554 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC244034.2-201ENST00000562504 509 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 MIR4801-201ENST00000582704 82 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.99□□□□□ -1.29
EPHB3P54753 OR7A11P-201ENST00000597719 953 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.99□□□□□ -1.29
EPHB3P54753 AC121247.2-201ENST00000604776 136 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL512427.1-201ENST00000618593 349 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AL683826.1-201ENST00000624104 627 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC017037.3-201ENST00000625016 472 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 AL121936.2-201ENST00000641935 662 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 CASC19-274ENST00000642018 970 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 AC087392.3-202ENST00000358446 1754 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 NBPF8-201ENST00000583271 5330 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 AC015871.3-201ENST00000618835 2261 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 LINC01613-201ENST00000561476 2780 ntBASIC6.99□□□□□ -1.29
EPHB3P54753 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
EPHB3P54753 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
EPHB3P54753 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.99□□□□□ -1.29
EPHB3P54753 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
EPHB3P54753 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms