RNA–Protein interactions for RNA: ENST00000390888.1

RNU6-298P-201, Transcript of RNA, U6 small nuclear 298, pseudogene, humanhuman

BASIC

Gene RNU6-298P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-298P-201ENST00000390888 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
RNU6-298P-201ENST00000390888 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
RNU6-298P-201ENST00000390888 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
RNU6-298P-201ENST00000390888 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
RNU6-298P-201ENST00000390888 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
RNU6-298P-201ENST00000390888 FOXD1Q16676 465 aa19.64■□□□□ 0.73
RNU6-298P-201ENST00000390888 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
RNU6-298P-201ENST00000390888 ADRA2BP18089 450 aa19.02■□□□□ 0.64
RNU6-298P-201ENST00000390888 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
RNU6-298P-201ENST00000390888 MSH5O43196 834 aa18.08■□□□□ 0.48
RNU6-298P-201ENST00000390888 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
RNU6-298P-201ENST00000390888 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
RNU6-298P-201ENST00000390888 KCNA4P22459 653 aa17.41■□□□□ 0.38
RNU6-298P-201ENST00000390888 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
RNU6-298P-201ENST00000390888 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
RNU6-298P-201ENST00000390888 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
RNU6-298P-201ENST00000390888 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
RNU6-298P-201ENST00000390888 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
RNU6-298P-201ENST00000390888 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
RNU6-298P-201ENST00000390888 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
RNU6-298P-201ENST00000390888 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
RNU6-298P-201ENST00000390888 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
RNU6-298P-201ENST00000390888 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
RNU6-298P-201ENST00000390888 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
RNU6-298P-201ENST00000390888 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
RNU6-298P-201ENST00000390888 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
RNU6-298P-201ENST00000390888 ZBTB22O15209 634 aa16■□□□□ 0.15
RNU6-298P-201ENST00000390888 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
RNU6-298P-201ENST00000390888 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
RNU6-298P-201ENST00000390888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
RNU6-298P-201ENST00000390888 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
RNU6-298P-201ENST00000390888 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
RNU6-298P-201ENST00000390888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
RNU6-298P-201ENST00000390888 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
RNU6-298P-201ENST00000390888 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
RNU6-298P-201ENST00000390888 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
RNU6-298P-201ENST00000390888 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
RNU6-298P-201ENST00000390888 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
RNU6-298P-201ENST00000390888 APLP2Q06481 763 aa15.32■□□□□ 0.04
RNU6-298P-201ENST00000390888 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
RNU6-298P-201ENST00000390888 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
RNU6-298P-201ENST00000390888 CAPN15O75808 1086 aa15.09■□□□□ 0.01
RNU6-298P-201ENST00000390888 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
RNU6-298P-201ENST00000390888 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
RNU6-298P-201ENST00000390888 CACNB1Q02641 598 aaPredicted RBP15□□□□□ -0.01
RNU6-298P-201ENST00000390888 POLA2Q14181 598 aa14.86□□□□□ -0.03
RNU6-298P-201ENST00000390888 ABCB7O75027 752 aa14.8□□□□□ -0.04
RNU6-298P-201ENST00000390888 DSG3P32926 999 aa14.79□□□□□ -0.04
RNU6-298P-201ENST00000390888 FBLN2P98095 1184 aa14.63□□□□□ -0.07
RNU6-298P-201ENST00000390888 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
RNU6-298P-201ENST00000390888 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
RNU6-298P-201ENST00000390888 FKBP8Q14318 412 aa14.51□□□□□ -0.09
RNU6-298P-201ENST00000390888 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
RNU6-298P-201ENST00000390888 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
RNU6-298P-201ENST00000390888 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
RNU6-298P-201ENST00000390888 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
RNU6-298P-201ENST00000390888 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
RNU6-298P-201ENST00000390888 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
RNU6-298P-201ENST00000390888 PROM2Q8N271 834 aa14.12□□□□□ -0.15
RNU6-298P-201ENST00000390888 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
RNU6-298P-201ENST00000390888 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
RNU6-298P-201ENST00000390888 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
RNU6-298P-201ENST00000390888 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
RNU6-298P-201ENST00000390888 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
RNU6-298P-201ENST00000390888 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
RNU6-298P-201ENST00000390888 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
RNU6-298P-201ENST00000390888 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
RNU6-298P-201ENST00000390888 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
RNU6-298P-201ENST00000390888 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
RNU6-298P-201ENST00000390888 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
RNU6-298P-201ENST00000390888 MIER1Q8N108 512 aa13.64□□□□□ -0.23
RNU6-298P-201ENST00000390888 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
RNU6-298P-201ENST00000390888 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
RNU6-298P-201ENST00000390888 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
RNU6-298P-201ENST00000390888 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
RNU6-298P-201ENST00000390888 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
RNU6-298P-201ENST00000390888 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
RNU6-298P-201ENST00000390888 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
RNU6-298P-201ENST00000390888 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
RNU6-298P-201ENST00000390888 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
RNU6-298P-201ENST00000390888 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
RNU6-298P-201ENST00000390888 SPOCK2Q92563 424 aa13.42□□□□□ -0.26
RNU6-298P-201ENST00000390888 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNU6-298P-201ENST00000390888 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
RNU6-298P-201ENST00000390888 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
RNU6-298P-201ENST00000390888 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
RNU6-298P-201ENST00000390888 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
RNU6-298P-201ENST00000390888 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
RNU6-298P-201ENST00000390888 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
RNU6-298P-201ENST00000390888 NUBP1P53384 320 aa13.23□□□□□ -0.29
RNU6-298P-201ENST00000390888 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
RNU6-298P-201ENST00000390888 PKD2Q13563 968 aa13.18□□□□□ -0.3
RNU6-298P-201ENST00000390888 GSE1Q14687 1217 aa13.16□□□□□ -0.3
RNU6-298P-201ENST00000390888 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
RNU6-298P-201ENST00000390888 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
RNU6-298P-201ENST00000390888 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
RNU6-298P-201ENST00000390888 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
RNU6-298P-201ENST00000390888 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
RNU6-298P-201ENST00000390888 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
RNU6-298P-201ENST00000390888 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms