RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
LINC02049-201ENST00000490647 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
LINC02049-201ENST00000490647 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
LINC02049-201ENST00000490647 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
LINC02049-201ENST00000490647 FOXD1Q16676 465 aa20.26■□□□□ 0.83
LINC02049-201ENST00000490647 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
LINC02049-201ENST00000490647 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
LINC02049-201ENST00000490647 ADRA2BP18089 450 aa19.51■□□□□ 0.71
LINC02049-201ENST00000490647 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
LINC02049-201ENST00000490647 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
LINC02049-201ENST00000490647 MSH5O43196 834 aa18.55■□□□□ 0.56
LINC02049-201ENST00000490647 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
LINC02049-201ENST00000490647 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
LINC02049-201ENST00000490647 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
LINC02049-201ENST00000490647 KCNA4P22459 653 aa17.57■□□□□ 0.4
LINC02049-201ENST00000490647 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
LINC02049-201ENST00000490647 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
LINC02049-201ENST00000490647 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
LINC02049-201ENST00000490647 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
LINC02049-201ENST00000490647 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
LINC02049-201ENST00000490647 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
LINC02049-201ENST00000490647 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
LINC02049-201ENST00000490647 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
LINC02049-201ENST00000490647 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
LINC02049-201ENST00000490647 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
LINC02049-201ENST00000490647 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
LINC02049-201ENST00000490647 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
LINC02049-201ENST00000490647 ZBTB22O15209 634 aa16.23■□□□□ 0.19
LINC02049-201ENST00000490647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
LINC02049-201ENST00000490647 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
LINC02049-201ENST00000490647 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
LINC02049-201ENST00000490647 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
LINC02049-201ENST00000490647 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
LINC02049-201ENST00000490647 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
LINC02049-201ENST00000490647 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
LINC02049-201ENST00000490647 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
LINC02049-201ENST00000490647 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
LINC02049-201ENST00000490647 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
LINC02049-201ENST00000490647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
LINC02049-201ENST00000490647 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
LINC02049-201ENST00000490647 CAPN15O75808 1086 aa15.44■□□□□ 0.06
LINC02049-201ENST00000490647 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
LINC02049-201ENST00000490647 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
LINC02049-201ENST00000490647 APLP2Q06481 763 aa15.37■□□□□ 0.05
LINC02049-201ENST00000490647 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
LINC02049-201ENST00000490647 ABCB7O75027 752 aa15.22■□□□□ 0.03
LINC02049-201ENST00000490647 DSG3P32926 999 aa15.21■□□□□ 0.03
LINC02049-201ENST00000490647 POLA2Q14181 598 aa15.12■□□□□ 0.01
LINC02049-201ENST00000490647 POTEHQ6S545 545 aa14.92□□□□□ -0.02
LINC02049-201ENST00000490647 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
LINC02049-201ENST00000490647 FBLN2P98095 1184 aa14.71□□□□□ -0.05
LINC02049-201ENST00000490647 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
LINC02049-201ENST00000490647 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
LINC02049-201ENST00000490647 FKBP8Q14318 412 aa14.48□□□□□ -0.09
LINC02049-201ENST00000490647 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
LINC02049-201ENST00000490647 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
LINC02049-201ENST00000490647 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
LINC02049-201ENST00000490647 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
LINC02049-201ENST00000490647 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
LINC02049-201ENST00000490647 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
LINC02049-201ENST00000490647 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
LINC02049-201ENST00000490647 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC02049-201ENST00000490647 AKT1S1Q96B36 256 aa14.22□□□□□ -0.13
LINC02049-201ENST00000490647 PROM2Q8N271 834 aa14.21□□□□□ -0.13
LINC02049-201ENST00000490647 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
LINC02049-201ENST00000490647 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
LINC02049-201ENST00000490647 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
LINC02049-201ENST00000490647 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
LINC02049-201ENST00000490647 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
LINC02049-201ENST00000490647 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
LINC02049-201ENST00000490647 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
LINC02049-201ENST00000490647 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
LINC02049-201ENST00000490647 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
LINC02049-201ENST00000490647 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC02049-201ENST00000490647 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
LINC02049-201ENST00000490647 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
LINC02049-201ENST00000490647 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
LINC02049-201ENST00000490647 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
LINC02049-201ENST00000490647 MIER1Q8N108 512 aa13.66□□□□□ -0.22
LINC02049-201ENST00000490647 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
LINC02049-201ENST00000490647 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
LINC02049-201ENST00000490647 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
LINC02049-201ENST00000490647 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
LINC02049-201ENST00000490647 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
LINC02049-201ENST00000490647 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
LINC02049-201ENST00000490647 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
LINC02049-201ENST00000490647 HAX1O00165 279 aa13.39□□□□□ -0.27
LINC02049-201ENST00000490647 NUBP1P53384 320 aa13.38□□□□□ -0.27
LINC02049-201ENST00000490647 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
LINC02049-201ENST00000490647 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
LINC02049-201ENST00000490647 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
LINC02049-201ENST00000490647 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC02049-201ENST00000490647 EVX2Q03828 476 aa13.28□□□□□ -0.28
LINC02049-201ENST00000490647 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
LINC02049-201ENST00000490647 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
LINC02049-201ENST00000490647 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
LINC02049-201ENST00000490647 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
LINC02049-201ENST00000490647 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
LINC02049-201ENST00000490647 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
LINC02049-201ENST00000490647 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms