Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL162739.1-201ENST00000450606 307 ntBASIC9.87□□□□□ -0.83
CFTRP13569 RPS29P22-201ENST00000472363 168 ntBASIC9.87□□□□□ -0.83
CFTRP13569 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.87□□□□□ -0.83
CFTRP13569 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.87□□□□□ -0.83
CFTRP13569 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC9.87□□□□□ -0.83
CFTRP13569 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.87□□□□□ -0.83
CFTRP13569 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.87□□□□□ -0.83
CFTRP13569 AC011840.5-201ENST00000582125 771 ntBASIC9.87□□□□□ -0.83
CFTRP13569 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.87□□□□□ -0.83
CFTRP13569 AC006116.3-201ENST00000592968 361 ntBASIC9.87□□□□□ -0.83
CFTRP13569 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.87□□□□□ -0.83
CFTRP13569 AC090527.3-201ENST00000619041 548 ntBASIC9.87□□□□□ -0.83
CFTRP13569 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
CFTRP13569 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
CFTRP13569 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
CFTRP13569 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CFTRP13569 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC9.87□□□□□ -0.83
CFTRP13569 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CFTRP13569 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.87□□□□□ -0.83
CFTRP13569 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
CFTRP13569 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CFTRP13569 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
CFTRP13569 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CFTRP13569 AL139128.1-201ENST00000413921 941 ntBASIC9.86□□□□□ -0.83
CFTRP13569 PA2G4P6-201ENST00000438325 1197 ntBASIC9.86□□□□□ -0.83
CFTRP13569 RPL21P133-201ENST00000443666 476 ntBASIC9.86□□□□□ -0.83
CFTRP13569 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.86□□□□□ -0.83
CFTRP13569 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.86□□□□□ -0.83
CFTRP13569 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
CFTRP13569 CYP4F27P-201ENST00000514557 494 ntBASIC9.86□□□□□ -0.83
CFTRP13569 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.86□□□□□ -0.83
CFTRP13569 FAM25E-202ENST00000608562 189 ntBASIC9.86□□□□□ -0.83
CFTRP13569 AP000550.3-201ENST00000637734 379 ntBASIC9.86□□□□□ -0.83
CFTRP13569 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CFTRP13569 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CFTRP13569 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CFTRP13569 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.86□□□□□ -0.83
CFTRP13569 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.86□□□□□ -0.83
CFTRP13569 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.86□□□□□ -0.83
CFTRP13569 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.86□□□□□ -0.83
CFTRP13569 IMMTP1-201ENST00000435590 2219 ntBASIC9.86□□□□□ -0.83
CFTRP13569 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC9.86□□□□□ -0.83
CFTRP13569 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CFTRP13569 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.86□□□□□ -0.83
CFTRP13569 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
CFTRP13569 RNVU1-6-201ENST00000364688 164 ntBASIC9.85□□□□□ -0.83
CFTRP13569 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
CFTRP13569 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
CFTRP13569 CEACAMP7-201ENST00000444105 496 ntBASIC9.85□□□□□ -0.83
CFTRP13569 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
CFTRP13569 IGLV2-34-201ENST00000490007 283 ntBASIC9.85□□□□□ -0.83
CFTRP13569 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.85□□□□□ -0.83
CFTRP13569 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC9.85□□□□□ -0.83
CFTRP13569 BLZF2P-201ENST00000553776 1130 ntBASIC9.85□□□□□ -0.83
CFTRP13569 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.85□□□□□ -0.83
CFTRP13569 AP002505.2-201ENST00000623585 696 ntBASIC9.85□□□□□ -0.83
CFTRP13569 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CFTRP13569 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CFTRP13569 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
CFTRP13569 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
CFTRP13569 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.85□□□□□ -0.83
CFTRP13569 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
CFTRP13569 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
CFTRP13569 AC022893.2-201ENST00000564832 3296 ntBASIC9.85□□□□□ -0.83
CFTRP13569 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 RNU1-24P-201ENST00000364285 165 ntBASIC9.85□□□□□ -0.83
CFTRP13569 LDHAP2-201ENST00000437325 985 ntBASIC9.85□□□□□ -0.83
CFTRP13569 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.85□□□□□ -0.83
CFTRP13569 RN7SL352P-201ENST00000466002 277 ntBASIC9.85□□□□□ -0.83
CFTRP13569 RPL7P6-201ENST00000480903 738 ntBASIC9.85□□□□□ -0.83
CFTRP13569 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 CR383656.6-201ENST00000550518 394 ntBASIC9.85□□□□□ -0.83
CFTRP13569 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC9.85□□□□□ -0.83
CFTRP13569 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.85□□□□□ -0.83
CFTRP13569 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.85□□□□□ -0.83
CFTRP13569 AC025574.2-201ENST00000615621 514 ntBASIC9.85□□□□□ -0.83
CFTRP13569 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
CFTRP13569 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.84□□□□□ -0.83
CFTRP13569 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.84□□□□□ -0.83
CFTRP13569 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CFTRP13569 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms