Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 EIF3LP3-201ENST00000495197 822 ntBASIC5.81□□□□□ -1.48
SNX3O60493 KHDC1P1-201ENST00000511053 508 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX3O60493 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX3O60493 RNU6-551P-201ENST00000516661 103 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX3O60493 NPIPB14P-203ENST00000532298 987 ntBASIC5.81□□□□□ -1.48
SNX3O60493 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 AC091932.1-201ENST00000569381 427 ntBASIC5.81□□□□□ -1.48
SNX3O60493 TXNP4-201ENST00000575018 310 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AP006587.6-201ENST00000582128 1091 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC011193.2-201ENST00000582638 367 ntBASIC5.81□□□□□ -1.48
SNX3O60493 MIR3187-201ENST00000583431 70 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.81□□□□□ -1.48
SNX3O60493 AC008833.1-201ENST00000611633 691 ntBASIC5.81□□□□□ -1.48
SNX3O60493 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
SNX3O60493 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX3O60493 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX3O60493 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
SNX3O60493 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX3O60493 AC019178.1-201ENST00000392337 440 ntBASIC5.8□□□□□ -1.48
SNX3O60493 DHFRP2-201ENST00000414224 547 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC013268.2-201ENST00000420753 337 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX3O60493 VN1R53P-201ENST00000429536 957 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC112492.2-201ENST00000432774 1030 ntBASIC5.8□□□□□ -1.48
SNX3O60493 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AL359265.1-201ENST00000440296 795 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AC092106.1-201ENST00000444291 373 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AC099670.1-201ENST00000455141 783 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC093816.1-201ENST00000515076 913 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC021146.10-201ENST00000515628 706 ntBASIC5.8□□□□□ -1.48
SNX3O60493 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX3O60493 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 RN7SL426P-201ENST00000579106 295 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX3O60493 AC010632.3-201ENST00000611377 369 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC107905.1-201ENST00000616204 426 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AC138965.3-201ENST00000623875 498 ntBASIC5.8□□□□□ -1.48
SNX3O60493 AL355480.4-201ENST00000626823 69 ntBASIC5.8□□□□□ -1.48
SNX3O60493 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SNX3O60493 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SNX3O60493 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 CASC19-255ENST00000641733 1385 ntBASIC5.8□□□□□ -1.48
SNX3O60493 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX3O60493 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 AC003985.2-201ENST00000562268 1669 ntBASIC5.79□□□□□ -1.48
SNX3O60493 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 RNA5SP346-201ENST00000363541 121 ntBASIC5.79□□□□□ -1.48
SNX3O60493 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 RNA5SP431-201ENST00000410312 120 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 RPL21P50-201ENST00000417698 477 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms