Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC142086.3-201ENST00000563896 802 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC122134.1-201ENST00000565664 1104 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RPS28P1-201ENST00000604589 187 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
HPS5Q9UPZ3 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL353763.1-201ENST00000624467 1628 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 TNFSF15-201ENST00000374044 2789 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 OR1L1-202ENST00000373686 1083 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC004986.1-201ENST00000414855 607 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 MICG-208ENST00000416822 132 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ZYG11AP1-201ENST00000430329 837 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC096632.2-201ENST00000438139 1239 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ARL5AP2-201ENST00000444698 533 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL591379.2-201ENST00000450223 397 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 MED28P8-201ENST00000454831 521 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC008620.1-201ENST00000468453 592 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC011979.1-201ENST00000472300 483 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC130366.1-201ENST00000526505 1192 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 SDHCP4-201ENST00000532834 510 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC012146.2-201ENST00000576545 416 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL009028.1-201ENST00000604895 802 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AL392112.1-201ENST00000605115 829 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC026464.2-201ENST00000567834 2421 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 AC126474.2-201ENST00000623268 1750 ntBASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
HPS5Q9UPZ3 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 AL359715.3-201ENST00000569267 2123 ntBASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 EEF1A1P5-201ENST00000436459 1389 ntBASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 OR9G4-201ENST00000302957 984 ntBASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 RNU4-79P-201ENST00000362764 141 ntBASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
HPS5Q9UPZ3 RNA5SP185-201ENST00000390963 114 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms