Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC008498.2-201ENST00000624033 2322 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 SAMMSON-203ENST00000641005 2168 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 MAPK10-281ENST00000641170 3070 ntBASIC8.67□□□□□ -1.02
TRIM47Q96LD4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.67□□□□□ -1.02
TRIM47Q96LD4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 MFSD8-227ENST00000641393 4069 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 TCP1P3-201ENST00000414406 1498 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 Y_RNA.560-201ENST00000384689 102 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL355375.1-201ENST00000405686 392 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SNORA2C-201ENST00000408564 137 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC006960.1-201ENST00000419980 153 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC023128.2-201ENST00000420880 1223 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 PTP4A1P3-201ENST00000433661 420 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 GTF2IP3-201ENST00000433887 494 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 FGF7P5-201ENST00000441829 291 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL451074.4-201ENST00000447545 470 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 RPS20P24-201ENST00000457473 361 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 TPT1P7-201ENST00000458300 517 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 VN1R6P-201ENST00000458417 907 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL157777.1-201ENST00000468100 304 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 OR56A7P-201ENST00000524865 941 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC024405.1-201ENST00000532521 1042 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 NPM1P45-201ENST00000583151 559 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 BNIP3P9-201ENST00000603714 553 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CUX2P1-201ENST00000606426 298 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC122710.3-201ENST00000606566 541 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL596275.2-207ENST00000641188 675 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC018992.1-201ENST00000523778 2149 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AC138207.6-201ENST00000579164 1967 ntBASIC8.66□□□□□ -1.02
TRIM47Q96LD4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM47Q96LD4 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 SF3A3P1-201ENST00000446317 1477 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 SSX6-201ENST00000376932 562 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RNU6-207P-201ENST00000384137 107 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RNU11-6P-201ENST00000391127 133 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 SNORA81-201ENST00000408493 178 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 VTA1P1-201ENST00000414044 866 ntBASIC8.65□□□□□ -1.02
TRIM47Q96LD4 RPS7P9-201ENST00000414704 586 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms