RNA–Protein interactions for RNA: ENST00000433887.1

GTF2IP3-201, Transcript of general transcription factor IIi pseudogene 3, humanhuman

BASIC

Gene GTF2IP3, Length 494 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP3-201ENST00000433887 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
GTF2IP3-201ENST00000433887 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
GTF2IP3-201ENST00000433887 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
GTF2IP3-201ENST00000433887 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
GTF2IP3-201ENST00000433887 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
GTF2IP3-201ENST00000433887 FOXD1Q16676 465 aa18.34■□□□□ 0.53
GTF2IP3-201ENST00000433887 ADRA2BP18089 450 aa17.79■□□□□ 0.44
GTF2IP3-201ENST00000433887 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
GTF2IP3-201ENST00000433887 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
GTF2IP3-201ENST00000433887 MSH5O43196 834 aa16.85■□□□□ 0.29
GTF2IP3-201ENST00000433887 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
GTF2IP3-201ENST00000433887 KCNA4P22459 653 aa16.38■□□□□ 0.21
GTF2IP3-201ENST00000433887 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
GTF2IP3-201ENST00000433887 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
GTF2IP3-201ENST00000433887 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
GTF2IP3-201ENST00000433887 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
GTF2IP3-201ENST00000433887 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
GTF2IP3-201ENST00000433887 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
GTF2IP3-201ENST00000433887 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
GTF2IP3-201ENST00000433887 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
GTF2IP3-201ENST00000433887 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
GTF2IP3-201ENST00000433887 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
GTF2IP3-201ENST00000433887 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
GTF2IP3-201ENST00000433887 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
GTF2IP3-201ENST00000433887 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
GTF2IP3-201ENST00000433887 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
GTF2IP3-201ENST00000433887 ZBTB22O15209 634 aa15.07■□□□□ 0
GTF2IP3-201ENST00000433887 FOXD4L1Q9NU39 408 aa15.02■□□□□ -0
GTF2IP3-201ENST00000433887 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
GTF2IP3-201ENST00000433887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
GTF2IP3-201ENST00000433887 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
GTF2IP3-201ENST00000433887 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
GTF2IP3-201ENST00000433887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
GTF2IP3-201ENST00000433887 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
GTF2IP3-201ENST00000433887 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
GTF2IP3-201ENST00000433887 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
GTF2IP3-201ENST00000433887 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
GTF2IP3-201ENST00000433887 APLP2Q06481 763 aa14.33□□□□□ -0.12
GTF2IP3-201ENST00000433887 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
GTF2IP3-201ENST00000433887 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
GTF2IP3-201ENST00000433887 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
GTF2IP3-201ENST00000433887 CAPN15O75808 1086 aa14.11□□□□□ -0.15
GTF2IP3-201ENST00000433887 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
GTF2IP3-201ENST00000433887 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
GTF2IP3-201ENST00000433887 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
GTF2IP3-201ENST00000433887 POLA2Q14181 598 aa13.9□□□□□ -0.18
GTF2IP3-201ENST00000433887 ABCB7O75027 752 aa13.85□□□□□ -0.19
GTF2IP3-201ENST00000433887 DSG3P32926 999 aa13.81□□□□□ -0.2
GTF2IP3-201ENST00000433887 FBLN2P98095 1184 aa13.72□□□□□ -0.21
GTF2IP3-201ENST00000433887 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
GTF2IP3-201ENST00000433887 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
GTF2IP3-201ENST00000433887 FKBP8Q14318 412 aa13.69□□□□□ -0.22
GTF2IP3-201ENST00000433887 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
GTF2IP3-201ENST00000433887 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
GTF2IP3-201ENST00000433887 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
GTF2IP3-201ENST00000433887 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
GTF2IP3-201ENST00000433887 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
GTF2IP3-201ENST00000433887 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
GTF2IP3-201ENST00000433887 PROM2Q8N271 834 aa13.28□□□□□ -0.28
GTF2IP3-201ENST00000433887 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
GTF2IP3-201ENST00000433887 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
GTF2IP3-201ENST00000433887 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
GTF2IP3-201ENST00000433887 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
GTF2IP3-201ENST00000433887 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
GTF2IP3-201ENST00000433887 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
GTF2IP3-201ENST00000433887 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
GTF2IP3-201ENST00000433887 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
GTF2IP3-201ENST00000433887 SPDYE1Q8NFV5 336 aaPredicted RBP12.9□□□□□ -0.34
GTF2IP3-201ENST00000433887 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
GTF2IP3-201ENST00000433887 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
GTF2IP3-201ENST00000433887 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
GTF2IP3-201ENST00000433887 MIER1Q8N108 512 aa12.79□□□□□ -0.36
GTF2IP3-201ENST00000433887 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
GTF2IP3-201ENST00000433887 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
GTF2IP3-201ENST00000433887 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
GTF2IP3-201ENST00000433887 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
GTF2IP3-201ENST00000433887 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
GTF2IP3-201ENST00000433887 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
GTF2IP3-201ENST00000433887 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
GTF2IP3-201ENST00000433887 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
GTF2IP3-201ENST00000433887 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
GTF2IP3-201ENST00000433887 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
GTF2IP3-201ENST00000433887 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
GTF2IP3-201ENST00000433887 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
GTF2IP3-201ENST00000433887 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
GTF2IP3-201ENST00000433887 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
GTF2IP3-201ENST00000433887 PKD2Q13563 968 aa12.44□□□□□ -0.42
GTF2IP3-201ENST00000433887 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
GTF2IP3-201ENST00000433887 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
GTF2IP3-201ENST00000433887 NUBP1P53384 320 aa12.42□□□□□ -0.42
GTF2IP3-201ENST00000433887 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
GTF2IP3-201ENST00000433887 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
GTF2IP3-201ENST00000433887 GSE1Q14687 1217 aa12.35□□□□□ -0.43
GTF2IP3-201ENST00000433887 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
GTF2IP3-201ENST00000433887 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
GTF2IP3-201ENST00000433887 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
GTF2IP3-201ENST00000433887 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
GTF2IP3-201ENST00000433887 POTEHQ6S545 545 aa12.32□□□□□ -0.44
GTF2IP3-201ENST00000433887 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
GTF2IP3-201ENST00000433887 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms