RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
VTA1P1-201ENST00000414044 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
VTA1P1-201ENST00000414044 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
VTA1P1-201ENST00000414044 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
VTA1P1-201ENST00000414044 FOXD1Q16676 465 aa19.02■□□□□ 0.64
VTA1P1-201ENST00000414044 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
VTA1P1-201ENST00000414044 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
VTA1P1-201ENST00000414044 ADRA2BP18089 450 aa17.84■□□□□ 0.45
VTA1P1-201ENST00000414044 MSH5O43196 834 aa17.82■□□□□ 0.44
VTA1P1-201ENST00000414044 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
VTA1P1-201ENST00000414044 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
VTA1P1-201ENST00000414044 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
VTA1P1-201ENST00000414044 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
VTA1P1-201ENST00000414044 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
VTA1P1-201ENST00000414044 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
VTA1P1-201ENST00000414044 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
VTA1P1-201ENST00000414044 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
VTA1P1-201ENST00000414044 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
VTA1P1-201ENST00000414044 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
VTA1P1-201ENST00000414044 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
VTA1P1-201ENST00000414044 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
VTA1P1-201ENST00000414044 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
VTA1P1-201ENST00000414044 KCNA4P22459 653 aa15.22■□□□□ 0.03
VTA1P1-201ENST00000414044 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
VTA1P1-201ENST00000414044 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
VTA1P1-201ENST00000414044 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
VTA1P1-201ENST00000414044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
VTA1P1-201ENST00000414044 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
VTA1P1-201ENST00000414044 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
VTA1P1-201ENST00000414044 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
VTA1P1-201ENST00000414044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
VTA1P1-201ENST00000414044 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
VTA1P1-201ENST00000414044 APLP2Q06481 763 aa14.42□□□□□ -0.1
VTA1P1-201ENST00000414044 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
VTA1P1-201ENST00000414044 CAPN15O75808 1086 aa14.35□□□□□ -0.11
VTA1P1-201ENST00000414044 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
VTA1P1-201ENST00000414044 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
VTA1P1-201ENST00000414044 DSG3P32926 999 aa14.26□□□□□ -0.13
VTA1P1-201ENST00000414044 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
VTA1P1-201ENST00000414044 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
VTA1P1-201ENST00000414044 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
VTA1P1-201ENST00000414044 ZBTB22O15209 634 aa13.98□□□□□ -0.17
VTA1P1-201ENST00000414044 ABCB7O75027 752 aa13.98□□□□□ -0.17
VTA1P1-201ENST00000414044 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
VTA1P1-201ENST00000414044 POLA2Q14181 598 aa13.84□□□□□ -0.19
VTA1P1-201ENST00000414044 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
VTA1P1-201ENST00000414044 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
VTA1P1-201ENST00000414044 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
VTA1P1-201ENST00000414044 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
VTA1P1-201ENST00000414044 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
VTA1P1-201ENST00000414044 POTEHQ6S545 545 aa13.48□□□□□ -0.25
VTA1P1-201ENST00000414044 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
VTA1P1-201ENST00000414044 FBLN2P98095 1184 aa13.38□□□□□ -0.27
VTA1P1-201ENST00000414044 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
VTA1P1-201ENST00000414044 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
VTA1P1-201ENST00000414044 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
VTA1P1-201ENST00000414044 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
VTA1P1-201ENST00000414044 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
VTA1P1-201ENST00000414044 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
VTA1P1-201ENST00000414044 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
VTA1P1-201ENST00000414044 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
VTA1P1-201ENST00000414044 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
VTA1P1-201ENST00000414044 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
VTA1P1-201ENST00000414044 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
VTA1P1-201ENST00000414044 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
VTA1P1-201ENST00000414044 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
VTA1P1-201ENST00000414044 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
VTA1P1-201ENST00000414044 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
VTA1P1-201ENST00000414044 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
VTA1P1-201ENST00000414044 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
VTA1P1-201ENST00000414044 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
VTA1P1-201ENST00000414044 HAX1O00165 279 aa12.65□□□□□ -0.38
VTA1P1-201ENST00000414044 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
VTA1P1-201ENST00000414044 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
VTA1P1-201ENST00000414044 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
VTA1P1-201ENST00000414044 PROM2Q8N271 834 aa12.53□□□□□ -0.4
VTA1P1-201ENST00000414044 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
VTA1P1-201ENST00000414044 EVX2Q03828 476 aa12.46□□□□□ -0.41
VTA1P1-201ENST00000414044 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
VTA1P1-201ENST00000414044 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
VTA1P1-201ENST00000414044 FKBP8Q14318 412 aa12.35□□□□□ -0.43
VTA1P1-201ENST00000414044 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
VTA1P1-201ENST00000414044 CLCN6P51797 869 aa12.3□□□□□ -0.44
VTA1P1-201ENST00000414044 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTA1P1-201ENST00000414044 GABBR2O75899 941 aa12.25□□□□□ -0.45
VTA1P1-201ENST00000414044 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
VTA1P1-201ENST00000414044 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
VTA1P1-201ENST00000414044 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
VTA1P1-201ENST00000414044 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
VTA1P1-201ENST00000414044 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
VTA1P1-201ENST00000414044 MIER1Q8N108 512 aa12.14□□□□□ -0.47
VTA1P1-201ENST00000414044 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
VTA1P1-201ENST00000414044 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
VTA1P1-201ENST00000414044 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
VTA1P1-201ENST00000414044 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
VTA1P1-201ENST00000414044 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
VTA1P1-201ENST00000414044 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
VTA1P1-201ENST00000414044 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
VTA1P1-201ENST00000414044 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
VTA1P1-201ENST00000414044 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms