Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC233280.2-201ENST00000603917 1070 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AL589666.2-201ENST00000624603 618 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC006065.6-201ENST00000625201 545 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 AC074198.1-201ENST00000506546 1397 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 TRIM60P19-201ENST00000452879 1462 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AL353795.1-201ENST00000439134 1775 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC000367.1-201ENST00000452711 1766 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC007614.2-201ENST00000569877 1851 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 ZNF519P1-201ENST00000449011 1626 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 SOCS5P4-201ENST00000454743 1566 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 Y_RNA.72-201ENST00000362894 103 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL8A1P27658 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 AC092952.1-201ENST00000397646 1209 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL109918.1-202ENST00000406724 436 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC7.01□□□□□ -1.29
COL8A1P27658 RPL12P27-201ENST00000414870 496 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC244157.1-201ENST00000415642 163 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 SNX18P3-201ENST00000424993 835 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC016691.1-201ENST00000441321 413 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 RPL21P33-201ENST00000444831 484 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL050341.1-201ENST00000447743 313 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 OR6C5P-201ENST00000452388 923 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 SCDP1-201ENST00000455244 1081 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC233279.1-201ENST00000455300 423 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 CBX5P1-201ENST00000468470 561 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 RPL3P10-201ENST00000476002 1164 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 EIF3LP3-201ENST00000495197 822 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 RPL23AP80-201ENST00000495605 424 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 MRPL57P6-201ENST00000506570 309 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC022447.3-201ENST00000506865 495 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC108078.1-201ENST00000508073 725 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 ATP1B1P1-201ENST00000509767 915 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC079395.1-201ENST00000510981 262 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC109445.1-201ENST00000512356 383 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC044836.1-201ENST00000519514 274 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 PHBP2-201ENST00000532859 806 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 AL109628.1-201ENST00000556877 366 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms