Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC023245.1-201ENST00000468501 517 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 AC074386.1-201ENST00000476560 767 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.62□□□□□ -1.35
CHRNA1P02708 IGHV1-14-201ENST00000523391 241 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 AC090022.1-201ENST00000546569 311 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.62□□□□□ -1.35
CHRNA1P02708 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.62□□□□□ -1.35
CHRNA1P02708 AC018558.5-201ENST00000565840 952 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.62□□□□□ -1.35
CHRNA1P02708 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.62□□□□□ -1.35
CHRNA1P02708 AL352984.2-201ENST00000611153 546 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHRNA1P02708 AL049767.1-202ENST00000637826 242 ntBASIC6.62□□□□□ -1.35
CHRNA1P02708 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.62□□□□□ -1.35
CHRNA1P02708 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHRNA1P02708 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHRNA1P02708 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.62□□□□□ -1.35
CHRNA1P02708 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHRNA1P02708 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHRNA1P02708 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.62□□□□□ -1.35
CHRNA1P02708 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.62□□□□□ -1.35
CHRNA1P02708 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.62□□□□□ -1.35
CHRNA1P02708 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CHRNA1P02708 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.61□□□□□ -1.35
CHRNA1P02708 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 RARSP1-201ENST00000542842 1418 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHRNA1P02708 RN7SKP128-201ENST00000364270 303 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 RNA5SP500-201ENST00000364486 119 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 RN7SKP293-201ENST00000411389 296 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 SDHDP6-201ENST00000414693 480 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AL513325.1-201ENST00000417716 1034 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHRNA1P02708 MRPS21P3-201ENST00000436696 262 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.61□□□□□ -1.35
CHRNA1P02708 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 YWHAEP1-201ENST00000453697 763 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 OR56A7P-201ENST00000524865 941 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 DPPA3P2-202ENST00000557188 1219 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AL021918.2-201ENST00000613415 194 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.61□□□□□ -1.35
CHRNA1P02708 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 AL359091.1-201ENST00000449048 1734 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.61□□□□□ -1.35
CHRNA1P02708 CDY5P-201ENST00000411487 1580 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 CDY9P-201ENST00000451397 1580 ntBASIC6.61□□□□□ -1.35
CHRNA1P02708 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHRNA1P02708 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.6□□□□□ -1.35
CHRNA1P02708 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.6□□□□□ -1.35
CHRNA1P02708 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
CHRNA1P02708 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.6□□□□□ -1.35
CHRNA1P02708 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.6□□□□□ -1.35
CHRNA1P02708 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CHRNA1P02708 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHRNA1P02708 AL049634.1-201ENST00000453770 1720 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms