Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 AC137056.2-201ENST00000624055 1958 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
USP35Q9P2H5 CIR1P2-201ENST00000514821 1342 ntBASIC8.77□□□□□ -1.01
USP35Q9P2H5 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
USP35Q9P2H5 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC114876.1-201ENST00000490962 1366 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 RNA5SP333-201ENST00000363466 118 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 RNA5SP334-201ENST00000364825 118 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL590762.1-201ENST00000391782 432 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 CCNB2P1-201ENST00000399411 1150 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 RN7SKP144-201ENST00000411108 279 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 DHFRP2-201ENST00000414224 547 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 RPL23AP18-201ENST00000416139 468 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 DUTP4-201ENST00000424782 475 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 BRWD1P3-201ENST00000428816 390 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 HMGN1P6-201ENST00000438508 291 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 RPL6P30-201ENST00000443382 862 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC026826.1-201ENST00000493002 361 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 H3F3AP3-201ENST00000497682 407 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 LSM3P4-201ENST00000502948 309 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 OR7E99P-201ENST00000505750 922 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC025458.1-201ENST00000506046 166 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 MIMT1-201ENST00000597105 1050 ntBASIC8.76□□□□□ -1.01
USP35Q9P2H5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
USP35Q9P2H5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
USP35Q9P2H5 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AL663061.1-201ENST00000416625 580 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AL390879.2-203ENST00000426943 1121 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 RPL31P15-201ENST00000449770 338 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 MIR6768-201ENST00000610734 72 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AC129915.3-201ENST00000634128 948 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.75□□□□□ -1.01
USP35Q9P2H5 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AC022905.1-201ENST00000503430 3048 ntBASIC8.75□□□□□ -1.01
USP35Q9P2H5 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
USP35Q9P2H5 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USP35Q9P2H5 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USP35Q9P2H5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.74□□□□□ -1.01
USP35Q9P2H5 AL354854.1-201ENST00000455940 1363 ntBASIC8.74□□□□□ -1.01
USP35Q9P2H5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
USP35Q9P2H5 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms