Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC138915.4-201ENST00000565549 4147 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RN7SKP78-201ENST00000364711 318 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RNU6-468P-201ENST00000384003 109 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 SFR1P1-201ENST00000403720 688 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL049697.3-201ENST00000406493 982 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 UBE2V1P9-201ENST00000414760 368 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL158050.1-201ENST00000416077 457 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RPL23AP18-201ENST00000416139 468 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 ARAFP1-201ENST00000422172 605 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL121916.1-201ENST00000429405 308 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC005345.1-201ENST00000431868 217 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 ARL4AP3-201ENST00000441452 574 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC118469.1-201ENST00000442943 488 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PSMA6P2-201ENST00000457574 686 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RPL21P18-201ENST00000469899 480 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 OR7E22P-201ENST00000478335 1035 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 HMGB1P46-201ENST00000520062 610 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC012146.2-201ENST00000576545 416 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RPL29P33-201ENST00000587474 316 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 OR2AS2P-201ENST00000606902 342 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AL359715.5-201ENST00000623431 443 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 TSHZ2-205ENST00000626626 670 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC090897.3-201ENST00000636973 1157 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 QRSL1P1-201ENST00000400977 1540 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 ZNF876P-202ENST00000398732 1485 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNGAP1Q96PV0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 DLEU2L-201ENST00000371086 3555 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 RNU6-1214P-201ENST00000363650 109 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 Y_RNA.604-201ENST00000410574 102 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 RN7SKP188-201ENST00000410789 317 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 MTCYBP39-201ENST00000437562 491 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 UBE2D3P4-201ENST00000441973 436 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC091860.1-201ENST00000505723 432 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 ASNSP4-201ENST00000511103 447 ntBASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNGAP1Q96PV0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms