RNA–Protein interactions for RNA: ENST00000519929.1

LINC02143-201, Transcript of long intergenic non-protein coding RNA 2143, humanhuman

TSL 3 BASIC

Gene LINC02143, Length 520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02143-201ENST00000519929 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
LINC02143-201ENST00000519929 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
LINC02143-201ENST00000519929 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
LINC02143-201ENST00000519929 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
LINC02143-201ENST00000519929 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
LINC02143-201ENST00000519929 FOXD1Q16676 465 aa19.5■□□□□ 0.71
LINC02143-201ENST00000519929 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
LINC02143-201ENST00000519929 ADRA2BP18089 450 aa18.84■□□□□ 0.61
LINC02143-201ENST00000519929 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
LINC02143-201ENST00000519929 MSH5O43196 834 aa17.82■□□□□ 0.44
LINC02143-201ENST00000519929 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
LINC02143-201ENST00000519929 KCNA4P22459 653 aa17.16■□□□□ 0.34
LINC02143-201ENST00000519929 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
LINC02143-201ENST00000519929 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
LINC02143-201ENST00000519929 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
LINC02143-201ENST00000519929 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
LINC02143-201ENST00000519929 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
LINC02143-201ENST00000519929 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
LINC02143-201ENST00000519929 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
LINC02143-201ENST00000519929 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
LINC02143-201ENST00000519929 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
LINC02143-201ENST00000519929 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
LINC02143-201ENST00000519929 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
LINC02143-201ENST00000519929 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
LINC02143-201ENST00000519929 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
LINC02143-201ENST00000519929 ZBTB22O15209 634 aa15.86■□□□□ 0.13
LINC02143-201ENST00000519929 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
LINC02143-201ENST00000519929 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
LINC02143-201ENST00000519929 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
LINC02143-201ENST00000519929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
LINC02143-201ENST00000519929 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
LINC02143-201ENST00000519929 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
LINC02143-201ENST00000519929 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
LINC02143-201ENST00000519929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
LINC02143-201ENST00000519929 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
LINC02143-201ENST00000519929 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
LINC02143-201ENST00000519929 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
LINC02143-201ENST00000519929 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
LINC02143-201ENST00000519929 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
LINC02143-201ENST00000519929 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
LINC02143-201ENST00000519929 APLP2Q06481 763 aa14.92□□□□□ -0.02
LINC02143-201ENST00000519929 CAPN15O75808 1086 aa14.85□□□□□ -0.03
LINC02143-201ENST00000519929 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
LINC02143-201ENST00000519929 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
LINC02143-201ENST00000519929 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
LINC02143-201ENST00000519929 DSG3P32926 999 aa14.66□□□□□ -0.06
LINC02143-201ENST00000519929 ABCB7O75027 752 aa14.63□□□□□ -0.07
LINC02143-201ENST00000519929 POLA2Q14181 598 aa14.63□□□□□ -0.07
LINC02143-201ENST00000519929 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
LINC02143-201ENST00000519929 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
LINC02143-201ENST00000519929 FBLN2P98095 1184 aa14.29□□□□□ -0.12
LINC02143-201ENST00000519929 FKBP8Q14318 412 aa14.19□□□□□ -0.14
LINC02143-201ENST00000519929 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
LINC02143-201ENST00000519929 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
LINC02143-201ENST00000519929 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
LINC02143-201ENST00000519929 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
LINC02143-201ENST00000519929 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
LINC02143-201ENST00000519929 PROM2Q8N271 834 aa13.95□□□□□ -0.18
LINC02143-201ENST00000519929 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
LINC02143-201ENST00000519929 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
LINC02143-201ENST00000519929 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
LINC02143-201ENST00000519929 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC02143-201ENST00000519929 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
LINC02143-201ENST00000519929 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
LINC02143-201ENST00000519929 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
LINC02143-201ENST00000519929 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
LINC02143-201ENST00000519929 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
LINC02143-201ENST00000519929 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
LINC02143-201ENST00000519929 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
LINC02143-201ENST00000519929 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
LINC02143-201ENST00000519929 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
LINC02143-201ENST00000519929 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
LINC02143-201ENST00000519929 MIER1Q8N108 512 aa13.31□□□□□ -0.28
LINC02143-201ENST00000519929 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
LINC02143-201ENST00000519929 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
LINC02143-201ENST00000519929 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
LINC02143-201ENST00000519929 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC02143-201ENST00000519929 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
LINC02143-201ENST00000519929 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
LINC02143-201ENST00000519929 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
LINC02143-201ENST00000519929 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
LINC02143-201ENST00000519929 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
LINC02143-201ENST00000519929 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
LINC02143-201ENST00000519929 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
LINC02143-201ENST00000519929 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
LINC02143-201ENST00000519929 NUBP1P53384 320 aa13.06□□□□□ -0.32
LINC02143-201ENST00000519929 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
LINC02143-201ENST00000519929 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
LINC02143-201ENST00000519929 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
LINC02143-201ENST00000519929 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
LINC02143-201ENST00000519929 PKD2Q13563 968 aa12.96□□□□□ -0.33
LINC02143-201ENST00000519929 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC02143-201ENST00000519929 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
LINC02143-201ENST00000519929 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
LINC02143-201ENST00000519929 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
LINC02143-201ENST00000519929 GSE1Q14687 1217 aa12.81□□□□□ -0.36
LINC02143-201ENST00000519929 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
LINC02143-201ENST00000519929 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
LINC02143-201ENST00000519929 POTEHQ6S545 545 aa12.78□□□□□ -0.36
LINC02143-201ENST00000519929 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms