RNA–Protein interactions for RNA: ENST00000550516.1

AC096558.1-203, humanhuman

TSL 3 BASIC

Gene AC096558.1, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC096558.1-203ENST00000550516 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
AC096558.1-203ENST00000550516 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
AC096558.1-203ENST00000550516 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
AC096558.1-203ENST00000550516 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
AC096558.1-203ENST00000550516 FOXD1Q16676 465 aa23.25■■□□□ 1.31
AC096558.1-203ENST00000550516 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
AC096558.1-203ENST00000550516 MSH5O43196 834 aa21.76■■□□□ 1.07
AC096558.1-203ENST00000550516 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
AC096558.1-203ENST00000550516 PIAS4Q8N2W9 510 aaPredicted RBP21.7■■□□□ 1.06
AC096558.1-203ENST00000550516 ADRA2BP18089 450 aa21.64■■□□□ 1.05
AC096558.1-203ENST00000550516 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
AC096558.1-203ENST00000550516 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
AC096558.1-203ENST00000550516 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
AC096558.1-203ENST00000550516 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
AC096558.1-203ENST00000550516 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
AC096558.1-203ENST00000550516 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
AC096558.1-203ENST00000550516 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
AC096558.1-203ENST00000550516 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
AC096558.1-203ENST00000550516 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
AC096558.1-203ENST00000550516 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
AC096558.1-203ENST00000550516 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
AC096558.1-203ENST00000550516 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
AC096558.1-203ENST00000550516 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
AC096558.1-203ENST00000550516 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
AC096558.1-203ENST00000550516 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
AC096558.1-203ENST00000550516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
AC096558.1-203ENST00000550516 KCNA4P22459 653 aa18.03■□□□□ 0.48
AC096558.1-203ENST00000550516 U3KPZ7 1027 aaPredicted RBP17.77■□□□□ 0.44
AC096558.1-203ENST00000550516 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
AC096558.1-203ENST00000550516 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
AC096558.1-203ENST00000550516 CAPN15O75808 1086 aa17.44■□□□□ 0.38
AC096558.1-203ENST00000550516 DSG3P32926 999 aa17.39■□□□□ 0.37
AC096558.1-203ENST00000550516 APLP2Q06481 763 aa17.26■□□□□ 0.35
AC096558.1-203ENST00000550516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
AC096558.1-203ENST00000550516 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
AC096558.1-203ENST00000550516 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
AC096558.1-203ENST00000550516 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
AC096558.1-203ENST00000550516 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
AC096558.1-203ENST00000550516 ABCB7O75027 752 aa17.03■□□□□ 0.32
AC096558.1-203ENST00000550516 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
AC096558.1-203ENST00000550516 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
AC096558.1-203ENST00000550516 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
AC096558.1-203ENST00000550516 POLA2Q14181 598 aa16.71■□□□□ 0.27
AC096558.1-203ENST00000550516 POTEHQ6S545 545 aa16.64■□□□□ 0.25
AC096558.1-203ENST00000550516 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
AC096558.1-203ENST00000550516 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
AC096558.1-203ENST00000550516 ZBTB22O15209 634 aa16.58■□□□□ 0.24
AC096558.1-203ENST00000550516 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
AC096558.1-203ENST00000550516 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
AC096558.1-203ENST00000550516 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
AC096558.1-203ENST00000550516 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
AC096558.1-203ENST00000550516 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
AC096558.1-203ENST00000550516 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
AC096558.1-203ENST00000550516 FBLN2P98095 1184 aa15.97■□□□□ 0.15
AC096558.1-203ENST00000550516 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
AC096558.1-203ENST00000550516 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
AC096558.1-203ENST00000550516 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
AC096558.1-203ENST00000550516 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
AC096558.1-203ENST00000550516 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
AC096558.1-203ENST00000550516 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
AC096558.1-203ENST00000550516 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
AC096558.1-203ENST00000550516 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
AC096558.1-203ENST00000550516 SSUH2Q9Y2M2 353 aa15.69■□□□□ 0.1
AC096558.1-203ENST00000550516 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
AC096558.1-203ENST00000550516 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
AC096558.1-203ENST00000550516 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
AC096558.1-203ENST00000550516 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
AC096558.1-203ENST00000550516 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
AC096558.1-203ENST00000550516 HAX1O00165 279 aa15.52■□□□□ 0.08
AC096558.1-203ENST00000550516 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
AC096558.1-203ENST00000550516 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
AC096558.1-203ENST00000550516 EVX2Q03828 476 aa15.36■□□□□ 0.05
AC096558.1-203ENST00000550516 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
AC096558.1-203ENST00000550516 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
AC096558.1-203ENST00000550516 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
AC096558.1-203ENST00000550516 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
AC096558.1-203ENST00000550516 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
AC096558.1-203ENST00000550516 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
AC096558.1-203ENST00000550516 GABBR2O75899 941 aa15.01□□□□□ -0.01
AC096558.1-203ENST00000550516 CD44P16070 742 aaKnown RBP14.96□□□□□ -0.01
AC096558.1-203ENST00000550516 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
AC096558.1-203ENST00000550516 CLCN6P51797 869 aa14.81□□□□□ -0.04
AC096558.1-203ENST00000550516 PROM2Q8N271 834 aa14.79□□□□□ -0.04
AC096558.1-203ENST00000550516 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
AC096558.1-203ENST00000550516 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
AC096558.1-203ENST00000550516 POTEIP0CG38 1075 aa14.71□□□□□ -0.05
AC096558.1-203ENST00000550516 MNX1P50219 401 aaPredicted RBP14.7□□□□□ -0.06
AC096558.1-203ENST00000550516 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
AC096558.1-203ENST00000550516 LHX8Q68G74 356 aa14.63□□□□□ -0.07
AC096558.1-203ENST00000550516 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
AC096558.1-203ENST00000550516 DCBLD2Q96PD2 775 aa14.58□□□□□ -0.08
AC096558.1-203ENST00000550516 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
AC096558.1-203ENST00000550516 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
AC096558.1-203ENST00000550516 MIER1Q8N108 512 aa14.38□□□□□ -0.11
AC096558.1-203ENST00000550516 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
AC096558.1-203ENST00000550516 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
AC096558.1-203ENST00000550516 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
AC096558.1-203ENST00000550516 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
AC096558.1-203ENST00000550516 FKBP8Q14318 412 aa14.31□□□□□ -0.12
AC096558.1-203ENST00000550516 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms